AMCG00009839


Basic Information

Item Value
gene id AMCG00009839
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 1234756 ~ 1245100 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009839
ATGGCCTATGTGCATTCCTCCTTTGCTGTGGCAACGCCTAGCCTAGCTGAGTGCAAGAAGAGGCTGGAGAGGGGAACGTGGAGAAGGCTGGTCTTGTTCTGCTGTGCCATGGCTGGATTTATCTACTTCCTGAAGGCGCAACTGCACCAGAGAGCAGCAGGGGAGAAGCCTTTTGTTACCTATCTGTCCACAGCGAGTGGGAAAAAGGTGGATCCCCTCATCAATGTGACATCCTGGGGTGCCCCTATTGTGTGGGGAGATAGAGAGGAGTCCCAGCTGAGGAGAATGGAGTTCGCGGACAAGGGGGTCACCACAGGCCTGGCAGTGTTTGTCATTGGGAAGTATTCCCACTACCTACAGAAGTTCATTGTCTCAGCAGAGAGGTACTTTCTGGAAGGACAGGCTGTGACCTACTACATACTAACAGACAACCTGCGAGGGATCCCCAATCTAAGCTTGAGGACCGGTCGTAAGCTCAAGGCCTTATATATTGCAGAAAGGCCAGAGTGGGTCCACCTCTCCAGGACGAGAATGTCCCTGCTGAGTAGCAGCATCAAGGAGTTCATCAAGAATGAGGTGGATTACCTCTTCTGCATGGACGTCGACCAAGTCTTCATCAACCGGGTGGGGGCTGAGATTCTAGGGGACCTGGTGGCCACCTTCCACCCAGTGTACTTCAACAGGCCCCACTATACATTTCCATATGAGACTACGCTGGACTCCAAGGCCTATGTGGAAGACTCAGAAGGGGATTACTACTACACCTCTGAGCTCTATGGTGGTTTGTGCTCTGAGATTTATGAGCTAGCCTTGCTTTGTTCCCAGTTCATCATCCAGGATATGGAGATGAGTTATCATGCTTTCTTGTTCGAGGAGAGCTACCTTAACCGCTTCTTCATCAACAAGAGGCCCAGCAGAATCCTCTCCCCAGAGTACAGCTGGTGGGATGCCCCAGAGACATCAAACATTCAAGTGAAAAGGATCCTCTCACTGCAGAGGGGCTGCTTCCAGGACTCTGAGTCTAAGGGTGCCAACTGCTATAGCACTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009839 True 1050 mRNA 0.52 3 1234756 1245100

Neighbor

gene id symbol gene type direction distance location
AMCG00009840 NA coding upstream 11307 1197630 ~ 1223449 (+)
AMCG00009837 NA coding upstream 213342 1014074 ~ 1021414 (+)
AMCG00009842 NA coding upstream 260304 962006 ~ 974452 (+)
AMCG00009841 NA coding upstream 285067 949129 ~ 949689 (+)
AMCG00009843 NA coding upstream 312071 920888 ~ 922685 (+)
AMCG00009845 NA coding downstream 64625 1309725 ~ 1313842 (+)
AMCG00009850 LOC107735852 coding downstream 184834 1429934 ~ 1485095 (+)
AMCG00009854 NA coding downstream 266319 1511419 ~ 1511967 (+)
AMCG00009856 mctp1,LOC106580145,LOC107703246,LOC107720291,LOC107756292 coding downstream 342198 1587298 ~ 1593804 (+)
AMCG00009855 mctp1 coding downstream 453395 1698495 ~ 1715753 (+)
G75767 NA non-coding upstream 59802 1170706 ~ 1174954 (+)
G75743 NA non-coding upstream 203039 1031466 ~ 1031717 (+)
G75644 NA non-coding upstream 488684 742885 ~ 746072 (+)
G75642 NA non-coding upstream 493726 740479 ~ 741030 (+)
G75600 NA non-coding upstream 625981 586864 ~ 608775 (+)
G75817 NA non-coding downstream 153058 1398158 ~ 1399008 (+)
G75822 NA non-coding downstream 182911 1428011 ~ 1428389 (+)
G75826 NA non-coding downstream 240386 1485486 ~ 1486092 (+)
G75827 NA non-coding downstream 251401 1496501 ~ 1497008 (+)
G75910 NA non-coding downstream 889295 2134395 ~ 2154555 (+)
G75745 NA other upstream 197314 1037206 ~ 1037442 (+)
AMCG00009838 NA other upstream 238909 984596 ~ 995847 (+)
AMCG00009821 NA other upstream 357498 867680 ~ 877258 (+)
AMCG00009846 NA other downstream 21759 1266859 ~ 1298242 (+)
AMCG00009844 NA other downstream 77518 1322618 ~ 1327593 (+)
G75807 NA other downstream 88867 1333967 ~ 1335050 (+)
AMCG00009851 NA other downstream 115436 1360536 ~ 1368815 (+)
AMCG00009852 NA other downstream 164080 1409180 ~ 1423122 (+)

Expression


Co-expression Network