AMCG00009844


Basic Information

Item Value
gene id AMCG00009844
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 1322618 ~ 1327593 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009844
GACCCTCGGCGTCCAAGACGCTCTGTCGTCCCTGCAGCTCTGCTTCGGCTCAGCAATGGCGCAGGAGTTCGTGTCCGCTCGGATCAAAGGCGATAAAGTGGTTCTTTTCATGAAGCCCACTTGCACCTACTGCATCCTGGCTAAGGACGTGCTGTCCAAGTACAAATTTAAGAAAGCCCACCTGGAGCTCGTCGACATCAGTGAACGGACGGACATGGGCTGCATCATGGACTACTTTCTGCAGAAGACTGGCGCTCGCACCGTGCCCCGTGTGTTCATTGGCAAGGAATGCATTGGAGGGGGGAGTGACGTGGCTGAGTTGGATAAGAGTGGCGAGCTGGAGGGCATGCTGCAGGCCATTGGGGCACTTCAATGACTGATTGCTAGCTGGGGGTCCCAGTCACAGAAGTGTGCAGTACAGGAACAGGaagtcatctctctctctgaagatCAGAAAGTTACTGGCGATGAAATGAAGGAGCCAGGTGGCTAACTGTTGTGAGTTGTGCTGCTAAGgagcacagaaaacaaagccGCAAATCAACCAATATGACAAGTTTAACTGTTCGGTAGGAAATATAGAATCTTGATACAGCCTGATTTTATGCAGTTGCCCTTCTGCAATTCACTATGCAGAAAATACTAATTGGAAACAAGGATTTGCCATCAATGAAAATCACAGCACATAATGCCTCTTTACCAGCACGTATTTGTTCTTTTCATGATGTTATTTTGCATGTACATTTCCATTCATATAGCAACTTCATGATAATTTGTTATAGTATTGACCTTGTGTTATAACATTACCGCAATATGGAAATCATGTTATTATATGTAGCATATACTGCTACATATTGCATACAATACCGCCAATATATTTTCCTAAATATTTCTACAATCCCCCCTCACCCAATCCCCATCCGTTTCTCTCTCACCTGGGCCCTCCTGAGAAGGGTGACTATATTTAGGCTGGTGGTGAGCAGCTTCCTGCTGGGCATGCTCTCCAGGTACTTGCACACAGACACCTCACACAAGTGCTGCAAGCGGGTCAGCTAGTACATATCCACAAACACCAATAAAGACATGGCCTGCTGGAGACTATCTGCGGGGGGGGTGGAATCAGGAGGCAGGAGAGTTGGCCAGGTTTTTTTCTACCATTGCTTCTGTAACACTTTTAAAACCAATCTTGTGAAAAACTACTGCTAAGTGTTTAATGCCGATCTTGTTTGCATGTGTAGAGGAATTGCTTTAAGGAActccttacattttaaataaattgatattaccaaaa
>TU94657
AATTGACCCTCGGCGTCCAAGACGCTCTGTCGTCCCTGCAGCTCTGCTTCGGCTCAGCAATGGCGCAGGAGTTCGTGTCCGCTCGGATCAAAGGCGATAAAGTGGTTCTTTTCATGAAGCCCACTTGCACCTACTGCATCCTGGCTAAGGACGTGCTGTCCAAGTACAAATTTAAGAAAGCCCACCTGGAGCTCGTCGACATCAGTGAACGGACGGACATGGGCTGCATCATGGACTACTTTCTGCAGAAGACTGGCGCTCGCACCGTGCCCCGTGTGTTCATTGGCAAGGAATGCATTGGAGGGGGGAGTGACGTGGCTGAGTTGGATAAGAGTGGCGAGCTGGAGGGCATGCTGCAGGCCATTGGGGCACTTCAATGACTGATTGCTAGCTGGGGGTCCCAGTCACAGAAGTGTGCAGTACAGGAACAGGaagtcatctctctctctgaagatCAGAAAGTTACTGGCGATGAAATGAAGGAGCCAGGTGGCTAACTGTTGTGAGTTGTGCTGCTAAGgagcacagaaaacaaagccGCAAATCAACCAATATGACAAGTTTAACTGTTCGGTAGGAAATATAGAATCTTGATACAGCCTGATTTTATGCAGTTGCCCTTCTGCAATTCACTATGCAGAAAATACTAATTGGAAACAAGGATTTGCCATCAATGAAAATCACAGCACATAATGCCTCTTTACCAGCACGTATTTGTTCTTTTCATGATGTTATTTTGCATGTACATTTCCATTCATATAGCAACTTCATGATAATTTGTTATAGTATTGACCTTGTGTTATAACATTACCGCAATATGGAAATCATGTTATTATATGTAGCATATACTGCTACATATTGCATACAATACCGCCAATATATTTTCCTAAATATTTCTACAATCCCCCCTCACCCAATCCCCATCCGTTTCTCTCTCACCTGGGCCCTCCTGAGAAGGGTGACTATATTTAGGCTGGTGGTGAGCAGCTTCCTGCTGGGCATGCTCTCCAGGTACTTGCACACAGACACCTCACACAAGTGCTGCAAGCGGGTCAGCTAGTACATATCCACAAACACCAATAAAGACATGGCCTGCTGGAGACTATCTGCGGGGGGGGTGGAATCAGGAGGCAGGAGAGTTGGCCAGGTTTTTTTCTACCATTGCTTCTGTAACACTTTTAAAACCAATCTTGTGAAAAACTACTGCTAAGTGTTTAATGCCGATCTTGTTTGCATGTGTAGAGGAATTGCTTTAAGGAActcctt

Function

GO: NA

KEGG:

id description
K03676 grxC, GLRX, GLRX2; glutaredoxin 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009844 True 1291 mRNA 0.46 3 1322622 1327593
TU94657 False 1266 TUCP 0.46 3 1322618 1327564

Neighbor

gene id symbol gene type direction distance location
AMCG00009845 NA coding upstream 8776 1309725 ~ 1313842 (+)
AMCG00009839 NA coding upstream 77518 1234756 ~ 1245100 (+)
AMCG00009840 NA coding upstream 99169 1197630 ~ 1223449 (+)
AMCG00009837 NA coding upstream 301204 1014074 ~ 1021414 (+)
AMCG00009842 NA coding upstream 348166 962006 ~ 974452 (+)
AMCG00009850 LOC107735852 coding downstream 102341 1429934 ~ 1485095 (+)
AMCG00009854 NA coding downstream 183826 1511419 ~ 1511967 (+)
AMCG00009856 mctp1,LOC106580145,LOC107703246,LOC107720291,LOC107756292 coding downstream 259705 1587298 ~ 1593804 (+)
AMCG00009855 mctp1 coding downstream 370902 1698495 ~ 1715753 (+)
AMCG00009858 NA coding downstream 457920 1785513 ~ 1809475 (+)
G75767 NA non-coding upstream 147664 1170706 ~ 1174954 (+)
G75743 NA non-coding upstream 290901 1031466 ~ 1031717 (+)
G75644 NA non-coding upstream 576546 742885 ~ 746072 (+)
G75642 NA non-coding upstream 581588 740479 ~ 741030 (+)
G75600 NA non-coding upstream 713843 586864 ~ 608775 (+)
G75817 NA non-coding downstream 70565 1398158 ~ 1399008 (+)
G75822 NA non-coding downstream 100418 1428011 ~ 1428389 (+)
G75826 NA non-coding downstream 157893 1485486 ~ 1486092 (+)
G75827 NA non-coding downstream 168908 1496501 ~ 1497008 (+)
G75910 NA non-coding downstream 806802 2134395 ~ 2154555 (+)
AMCG00009846 NA other upstream 24376 1266859 ~ 1298242 (+)
G75745 NA other upstream 285176 1037206 ~ 1037442 (+)
AMCG00009838 NA other upstream 326771 984596 ~ 995847 (+)
AMCG00009821 NA other upstream 445360 867680 ~ 877258 (+)
G75807 NA other downstream 6374 1333967 ~ 1335050 (+)
AMCG00009851 NA other downstream 32943 1360536 ~ 1368815 (+)
AMCG00009852 NA other downstream 81587 1409180 ~ 1423122 (+)
AMCG00009863 NA other downstream 1424667 2752260 ~ 2768508 (+)
AMCG00009898 tmem167a other downstream 3583377 4910970 ~ 4920884 (+)

Expression


Co-expression Network