AMCG00009845


Basic Information

Item Value
gene id AMCG00009845
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 1309725 ~ 1313842 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009845
AAGTACACTGCAGTAGTTTCCCTCAATCAGCGGCAGAGCTACAAAAACGACTTTAATGCCGAGTATGAGGAGTACAGGAGCCTGCACGCCCGGGTGGACAATGTGACCCGCAGGTTTGCGAAGCTTGATGCAGAACGGAAACGCCTCTTTCCTGGAACCAAGGAGTATCAGATAATACATGAAGAAGTATTGCAAGaatacaagaaaatgaaagagAGCAGTCCCAACTACCAGGAGGAGAAGTGCCGTTGTGAGTATCTCCACAACAAGCTGGCACACATAAAGAGAGTGATTGCAGAGTTTGACCAGCGGCGAACGCAGTCCTGGCAC

Function

GO:

id name namespace
GO:0006368 transcription elongation from RNA polymerase II promoter biological_process
GO:0008023 transcription elongation factor complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009845 True 330 mRNA 0.49 3 1309725 1313842

Neighbor

gene id symbol gene type direction distance location
AMCG00009839 NA coding upstream 64625 1234756 ~ 1245100 (+)
AMCG00009840 NA coding upstream 86276 1197630 ~ 1223449 (+)
AMCG00009837 NA coding upstream 288311 1014074 ~ 1021414 (+)
AMCG00009842 NA coding upstream 335273 962006 ~ 974452 (+)
AMCG00009841 NA coding upstream 360036 949129 ~ 949689 (+)
AMCG00009850 LOC107735852 coding downstream 116092 1429934 ~ 1485095 (+)
AMCG00009854 NA coding downstream 197577 1511419 ~ 1511967 (+)
AMCG00009856 mctp1,LOC106580145,LOC107703246,LOC107720291,LOC107756292 coding downstream 273456 1587298 ~ 1593804 (+)
AMCG00009855 mctp1 coding downstream 384653 1698495 ~ 1715753 (+)
AMCG00009858 NA coding downstream 471671 1785513 ~ 1809475 (+)
G75767 NA non-coding upstream 134771 1170706 ~ 1174954 (+)
G75743 NA non-coding upstream 278008 1031466 ~ 1031717 (+)
G75644 NA non-coding upstream 563653 742885 ~ 746072 (+)
G75642 NA non-coding upstream 568695 740479 ~ 741030 (+)
G75600 NA non-coding upstream 700950 586864 ~ 608775 (+)
G75817 NA non-coding downstream 84316 1398158 ~ 1399008 (+)
G75822 NA non-coding downstream 114169 1428011 ~ 1428389 (+)
G75826 NA non-coding downstream 171644 1485486 ~ 1486092 (+)
G75827 NA non-coding downstream 182659 1496501 ~ 1497008 (+)
G75910 NA non-coding downstream 820553 2134395 ~ 2154555 (+)
AMCG00009846 NA other upstream 11483 1266859 ~ 1298242 (+)
G75745 NA other upstream 272283 1037206 ~ 1037442 (+)
AMCG00009838 NA other upstream 313878 984596 ~ 995847 (+)
AMCG00009821 NA other upstream 432467 867680 ~ 877258 (+)
AMCG00009844 NA other downstream 8776 1322618 ~ 1327593 (+)
G75807 NA other downstream 20125 1333967 ~ 1335050 (+)
AMCG00009851 NA other downstream 46694 1360536 ~ 1368815 (+)
AMCG00009852 NA other downstream 95338 1409180 ~ 1423122 (+)
AMCG00009863 NA other downstream 1438418 2752260 ~ 2768508 (+)

Expression


Co-expression Network