AMCG00009851


Basic Information

Item Value
gene id AMCG00009851
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 1360536 ~ 1368815 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009851
ATGAAGGACCCCCTGCTGTCCTGCTGCCTGCCTGAGATGCTGCAGTTTCTCTATGCAGGAGCCTATCAGTGGAAGGAGCTGCAGTCCTCTGTGGAGAAAAAGCTGTGGAGTGCACAGGAGGTGCGTGAGCTGCTGCAGACTGTAAGACGACTTCTCGGTAATGAAGAGGACCCCATCTCTCTGGGCAGGTTCCTCAACAGCCCAGTGTTCTCAGACATCGCGTTCATGCTTGAGGGTCAGCAACATATTGACCTGCTAGGCACGCCTGTTCCAGCCCACAGGGCAGTCCTCTCAGTGCCCTGCAAGTTGATGGCCATAATGTTCAATGGGAAATATGTGGAGGCCAGCAGTAGTGAGTTTTCCTTCCTTGGCATCTCCAGAGAGACCTTCCTGTCTTACCTGGAATACATTTACACCGATGCATGCTGTCCAGATAGTCTCCAGCAGGCCATGTCTTTATTGGTGTTTGCGGATATGTACCAGCTGACCCGCTTGCAGCACTTGTGTGAGGCGTGTGTGTGCAAGTACCTGGAGAGCATGCCCAGCAGGAAGCTGCTCACCACCAGCCTAAATATAGTCACCCTTCTCAGGAGGGCCCAGAAATAA
>TU94664
AGCGACAGCACACACAGGAGTAATGGATGCCCCCCATCCCGGGTCCTCATGAAGGACCCCCTGCTGTCCTGCTGCCTGCCTGAGATGCTGCAGTTTCTCTATGCAGGAGCCTATCAGTGGAAGGAGCTGCAGTCCTCTGTGGAGAAAAAGCTGTGGAGTGCACAGGAGGTGCGTGAGCTGCTGCAGACTGTAAGACGACTTCTCGGTAATGAAGAGTGCTCAAATGACCATGGGCCCCCTAGGATCCCCCAGCAGGACCCCATCTCTCTGGGCAGGTTCCTCAACAGCCCAGTGTTCTCAGACATCGCGTTCATGCTTGAGGGCACGCCTGTTCCAGCCCACAGGGCAGTCCTCTCAGTGCCCTGCAAGTTGATGGCCATAATGTTCAATGGGAAATATGTGGAGGCCAGCAGTAGTGAGTTTTCCTTCCTTGGCATCTCCAGAGAGACCTTCCTGTCTTACCTGGAATACATTTACACCGATGCATGCTGTCCAGATAGTCTCCAGCAGGCCATGTCTTTATTGGTGTTTGCGGATATGTACCAGCTGACCCGCTTGCAGCACTTGTGTGAGGCGTGTGTGTGCAAGTACCTGGAGAGCATGCCCAGCAGGAAGCTGCTCACCACCAGCCTAAATATAGTCACCCTTCTCAGGAGGGCCCAGGTAAGAGAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009851 False 606 mRNA 0.53 6 1360584 1368815
TU94664 True 674 TUCP 0.55 5 1360536 1363834

Neighbor

gene id symbol gene type direction distance location
AMCG00009845 NA coding upstream 46694 1309725 ~ 1313842 (+)
AMCG00009839 NA coding upstream 115436 1234756 ~ 1245100 (+)
AMCG00009840 NA coding upstream 137087 1197630 ~ 1223449 (+)
AMCG00009837 NA coding upstream 339122 1014074 ~ 1021414 (+)
AMCG00009842 NA coding upstream 386084 962006 ~ 974452 (+)
AMCG00009850 LOC107735852 coding downstream 61119 1429934 ~ 1485095 (+)
AMCG00009854 NA coding downstream 142604 1511419 ~ 1511967 (+)
AMCG00009856 mctp1,LOC106580145,LOC107703246,LOC107720291,LOC107756292 coding downstream 218483 1587298 ~ 1593804 (+)
AMCG00009855 mctp1 coding downstream 329680 1698495 ~ 1715753 (+)
AMCG00009858 NA coding downstream 416698 1785513 ~ 1809475 (+)
G75767 NA non-coding upstream 185582 1170706 ~ 1174954 (+)
G75743 NA non-coding upstream 328819 1031466 ~ 1031717 (+)
G75644 NA non-coding upstream 614464 742885 ~ 746072 (+)
G75642 NA non-coding upstream 619506 740479 ~ 741030 (+)
G75600 NA non-coding upstream 751761 586864 ~ 608775 (+)
G75817 NA non-coding downstream 29343 1398158 ~ 1399008 (+)
G75822 NA non-coding downstream 59196 1428011 ~ 1428389 (+)
G75826 NA non-coding downstream 116671 1485486 ~ 1486092 (+)
G75827 NA non-coding downstream 127686 1496501 ~ 1497008 (+)
G75910 NA non-coding downstream 765580 2134395 ~ 2154555 (+)
G75807 NA other upstream 25486 1333967 ~ 1335050 (+)
AMCG00009844 NA other upstream 32943 1322618 ~ 1327593 (+)
AMCG00009846 NA other upstream 62294 1266859 ~ 1298242 (+)
G75745 NA other upstream 323094 1037206 ~ 1037442 (+)
AMCG00009838 NA other upstream 364689 984596 ~ 995847 (+)
AMCG00009852 NA other downstream 40365 1409180 ~ 1423122 (+)
AMCG00009863 NA other downstream 1383445 2752260 ~ 2768508 (+)
AMCG00009898 tmem167a other downstream 3542155 4910970 ~ 4920884 (+)
AMCG00009897 NA other downstream 3863817 5232632 ~ 5248181 (+)
AMCG00009915 NA other downstream 4397522 5766337 ~ 5769052 (+)

Expression


Co-expression Network