AMCG00009854


Basic Information

Item Value
gene id AMCG00009854
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 1511419 ~ 1511967 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009854
ATGGACGAGAAGCACCAGGAGGGAAGCGCCTGCGAGCAAGAGGCGCTGTCCTACCAGAAGAGGATCTGGAAGAATCTGCAGGAGAAGACCAAGCCTTTCCTGAGCTCCAAGACAGGCTCCGAGCGCCGCAGTGCAGAAGGAAAGAGGGAGACGGGCAAATGGATGTTCATGAGGAAGAAGAAGCAAGTCCTGGACCGCGTCTTTTCCTCCTCCCAGCCCAACCTCTGCTGCTCGGCTGCGGTGCGTCTCGACAGGGACAAGTCCCTGTGCTGTACGCCGGAGCCCGGCTGCAGTAAACCGGCGTCAGGGCTGAAGCAAGTCGGACCCAGAGATGCGGAGAGCGCCGGCTTGTCCAAGCAGACGGTGGCGGGACGCGGCAGCCCGAAGCCCGCAGTATCTCATCTCGTCCTGTCCCACCAAAAAAGCTCCTCTCTGGGGTCGGCATGCTTCGAGAGGCTGGTGGAGCCGGCTGGGGGCGAAACGGAGGAGCACAGGAGGATGAACGCCAGCGATTCTGTAAGTAAATCATCTTTTAAAACTCTTGCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009854 True 549 mRNA 0.60 1 1511419 1511967

Neighbor

gene id symbol gene type direction distance location
AMCG00009850 LOC107735852 coding upstream 26324 1429934 ~ 1485095 (+)
AMCG00009845 NA coding upstream 197577 1309725 ~ 1313842 (+)
AMCG00009839 NA coding upstream 266319 1234756 ~ 1245100 (+)
AMCG00009840 NA coding upstream 287970 1197630 ~ 1223449 (+)
AMCG00009837 NA coding upstream 490005 1014074 ~ 1021414 (+)
AMCG00009856 mctp1,LOC106580145,LOC107703246,LOC107720291,LOC107756292 coding downstream 75331 1587298 ~ 1593804 (+)
AMCG00009855 mctp1 coding downstream 186528 1698495 ~ 1715753 (+)
AMCG00009858 NA coding downstream 273546 1785513 ~ 1809475 (+)
AMCG00009860 NA coding downstream 301040 1813007 ~ 1825729 (+)
AMCG00009859 fam172a coding downstream 466110 1978077 ~ 1981600 (+)
G75827 NA non-coding upstream 14411 1496501 ~ 1497008 (+)
G75826 NA non-coding upstream 25327 1485486 ~ 1486092 (+)
G75822 NA non-coding upstream 83030 1428011 ~ 1428389 (+)
G75817 NA non-coding upstream 112411 1398158 ~ 1399008 (+)
G75767 NA non-coding upstream 336465 1170706 ~ 1174954 (+)
G75910 NA non-coding downstream 622428 2134395 ~ 2154555 (+)
G75914 nr2f1a,nr2f1,LOC107671052,LOC107567418,LOC106580150,LOC106585791 non-coding downstream 672412 2184379 ~ 2203222 (+)
G75957 NA non-coding downstream 869890 2381857 ~ 2386735 (+)
G75964 NA non-coding downstream 983534 2495501 ~ 2495715 (+)
G76050 NA non-coding downstream 1615155 3127122 ~ 3128106 (+)
AMCG00009852 NA other upstream 88297 1409180 ~ 1423122 (+)
AMCG00009851 NA other upstream 142604 1360536 ~ 1368815 (+)
G75807 NA other upstream 176369 1333967 ~ 1335050 (+)
AMCG00009844 NA other upstream 183826 1322618 ~ 1327593 (+)
AMCG00009846 NA other upstream 213177 1266859 ~ 1298242 (+)
AMCG00009863 NA other downstream 1240293 2752260 ~ 2768508 (+)
AMCG00009898 tmem167a other downstream 3399003 4910970 ~ 4920884 (+)
AMCG00009897 NA other downstream 3720665 5232632 ~ 5248181 (+)
AMCG00009915 NA other downstream 4254370 5766337 ~ 5769052 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other downstream 4547275 6059242 ~ 6085806 (+)

Expression


Co-expression Network