AMCG00009878


Basic Information

Item Value
gene id AMCG00009878
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 3481976 ~ 3482596 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009878
ATGAAGAAGGCCTACGAGCTGAGTGTGCTGTGCGACTGCGAGATCGCGCTCATCATCTTTAACAGCACCAACAAACTGTTCCAGTACGCCAGCACGGACATGGACAAGGTTCTGCTCAAATATACAGAGTACAATGAGCCCCACGAGAGCCGGACGAACTCGGACATTGTTGAGGTTAAGGATGAACGCAATATCCTGGAGGATTTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009878 True 210 mRNA 0.50 2 3481976 3482596

Neighbor

gene id symbol gene type direction distance location
AMCG00009871 cetn3,LOC106563079 coding upstream 334482 3141929 ~ 3147494 (+)
AMCG00009869 NA coding upstream 345521 3129940 ~ 3136455 (+)
AMCG00009870 NA coding upstream 358926 3119111 ~ 3123050 (+)
AMCG00009868 LOC106580165,LOC108426240,LOC103032997,LOC106585857,LOC108255838,LOC105014633 coding upstream 578900 2891893 ~ 2903076 (+)
AMCG00009866 NA coding upstream 599893 2878709 ~ 2882083 (+)
AMCG00009879 NA coding downstream 11773 3494369 ~ 3512331 (+)
AMCG00009880 LOC106585770 coding downstream 146293 3628889 ~ 3659237 (+)
AMCG00009881 NA coding downstream 245683 3728279 ~ 3736645 (+)
AMCG00009885 NA coding downstream 834442 4317038 ~ 4317867 (+)
AMCG00009890 NA coding downstream 864068 4346664 ~ 4471973 (+)
G76077 NA non-coding upstream 61150 3420612 ~ 3420826 (+)
G76054 NA non-coding upstream 342083 3138953 ~ 3139893 (+)
G76052 NA non-coding upstream 352273 3129165 ~ 3129703 (+)
G76050 NA non-coding upstream 353870 3127122 ~ 3128106 (+)
G75964 NA non-coding upstream 986261 2495501 ~ 2495715 (+)
G76105 NA non-coding downstream 55901 3538497 ~ 3603605 (+)
G76163 NA non-coding downstream 313955 3796551 ~ 3797008 (+)
G76168 NA non-coding downstream 408565 3891161 ~ 3894819 (+)
G76186 NA non-coding downstream 770641 4253237 ~ 4253554 (+)
G76266 NA non-coding downstream 1675792 5158388 ~ 5228786 (+)
AMCG00009863 NA other upstream 713468 2752260 ~ 2768508 (+)
AMCG00009852 NA other upstream 2058854 1409180 ~ 1423122 (+)
AMCG00009851 NA other upstream 2113161 1360536 ~ 1368815 (+)
G75807 NA other upstream 2146926 1333967 ~ 1335050 (+)
AMCG00009844 NA other upstream 2154383 1322618 ~ 1327593 (+)
AMCG00009898 tmem167a other downstream 1428374 4910970 ~ 4920884 (+)
AMCG00009897 NA other downstream 1750036 5232632 ~ 5248181 (+)
AMCG00009915 NA other downstream 2283741 5766337 ~ 5769052 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other downstream 2576646 6059242 ~ 6085806 (+)
AMCG00009959 NA other downstream 3560001 7042597 ~ 7062734 (+)

Expression


Co-expression Network