AMCG00009885


Basic Information

Item Value
gene id AMCG00009885
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 4317038 ~ 4317867 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009885
ATGCTCTGCACATCTTCTCAACTTACTGGGCGATACTTGTCAGTCATTGCAGGAAAAGAGGAAACACGGTGGAACAGCTGGTTCAAAGCTGTTCATTTTCTTGCTAACCACCTGCAGGTTTATGTGGATTTTTTGGGGGATGGATATGAGCAAATCTGCAGTTCAGCTGTTGAAAATGTGGTCACTTTAAGTCAATCAGAAGAGATAAAACCACATGTGGCAGAAATAGAAGTGTTTGTACCAAGAATAATGGCAACTCTCACTGCTAACGAAAAACCTAACTCTCACATAAGTTGGGCAAAGTCTTTCAGTGGCATGACTGACAATATGTTAGCTAAGAAATCCCTTTGCGAAAACAGCAATAAAATCGAAGACTACATGACTAGTACTGGATGGTTTTGTCAACCCAATGCCAATTTTTTGAAAGCCTGCCAAGATTTTGATCCCAATCAGGCAAAACATCTGGATCTTGCATCACTAAATTCATTTAATGTTCAAAGACAATGGATCCCATGTTTCAAAAACAATGCGTTGGCAAAGGCAGATTTTTGTAGCTACAGCAATGCAGTTTCTGAAATGAAGTGCCTTGACATTGTGGAATTCTGGTGCAACTTAAAAGATCACTTTCTAAGTCTCACTGAGATCACTCTGAGGTGTTTGTTGGTGCCCGCTGACAGCGTGGATTGTGCACGGTCGTTTTCGTCTTACAAAGATGTCTTGCAGGATGATAGACGCTTGATCAAAGATGACAATCTGGCAATGTACAACATGCTGTTTCTGAATCGTGGAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009885 True 792 mRNA 0.41 3 4317038 4317867

Neighbor

gene id symbol gene type direction distance location
AMCG00009881 NA coding upstream 580393 3728279 ~ 3736645 (+)
AMCG00009880 LOC106585770 coding upstream 657801 3628889 ~ 3659237 (+)
AMCG00009879 NA coding upstream 804707 3494369 ~ 3512331 (+)
AMCG00009878 NA coding upstream 834442 3481976 ~ 3482596 (+)
AMCG00009871 cetn3,LOC106563079 coding upstream 1169544 3141929 ~ 3147494 (+)
AMCG00009890 NA coding downstream 28797 4346664 ~ 4471973 (+)
AMCG00009889 NA coding downstream 157425 4475292 ~ 4476458 (+)
AMCG00009891 NA coding downstream 159754 4477621 ~ 4478723 (+)
AMCG00009888 hapln1b,LOC107758638,LOC108425247,LOC107741669,LOC107602078,LOC107658619 coding downstream 381815 4699682 ~ 4716944 (+)
AMCG00009896 NA coding downstream 693511 5011378 ~ 5013330 (+)
G76186 NA non-coding upstream 63484 4253237 ~ 4253554 (+)
G76168 NA non-coding upstream 422219 3891161 ~ 3894819 (+)
G76163 NA non-coding upstream 520030 3796551 ~ 3797008 (+)
G76105 NA non-coding upstream 713433 3538497 ~ 3603605 (+)
G76077 NA non-coding upstream 896212 3420612 ~ 3420826 (+)
G76266 NA non-coding downstream 840521 5158388 ~ 5228786 (+)
G76346 NA non-coding downstream 1144656 5462523 ~ 5462811 (+)
G76408 NA non-coding downstream 1426390 5744257 ~ 5751212 (+)
G76417 NA non-coding downstream 1452388 5770255 ~ 5771092 (+)
G76418 NA non-coding downstream 1453807 5771674 ~ 5771949 (+)
AMCG00009863 NA other upstream 1548530 2752260 ~ 2768508 (+)
AMCG00009852 NA other upstream 2893916 1409180 ~ 1423122 (+)
AMCG00009851 NA other upstream 2948223 1360536 ~ 1368815 (+)
G75807 NA other upstream 2981988 1333967 ~ 1335050 (+)
AMCG00009844 NA other upstream 2989445 1322618 ~ 1327593 (+)
AMCG00009898 tmem167a other downstream 593103 4910970 ~ 4920884 (+)
AMCG00009897 NA other downstream 914765 5232632 ~ 5248181 (+)
AMCG00009915 NA other downstream 1448470 5766337 ~ 5769052 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other downstream 1741375 6059242 ~ 6085806 (+)
AMCG00009959 NA other downstream 2724730 7042597 ~ 7062734 (+)

Expression


Co-expression Network