Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009890 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 4346664 ~ 4471973 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0035235 | ionotropic glutamate receptor signaling pathway | biological_process |
| GO:0007215 | glutamate receptor signaling pathway | biological_process |
| id | description |
|---|---|
| ko00900 | Terpenoid backbone biosynthesis |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009890 | True | 627 | mRNA | 0.51 | 8 | 4346664 | 4471973 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009885 | NA | coding | upstream | 28797 | 4317038 ~ 4317867 (+) |
| AMCG00009881 | NA | coding | upstream | 610019 | 3728279 ~ 3736645 (+) |
| AMCG00009880 | LOC106585770 | coding | upstream | 687427 | 3628889 ~ 3659237 (+) |
| AMCG00009879 | NA | coding | upstream | 834333 | 3494369 ~ 3512331 (+) |
| AMCG00009878 | NA | coding | upstream | 864068 | 3481976 ~ 3482596 (+) |
| AMCG00009889 | NA | coding | downstream | 3319 | 4475292 ~ 4476458 (+) |
| AMCG00009891 | NA | coding | downstream | 5648 | 4477621 ~ 4478723 (+) |
| AMCG00009888 | hapln1b,LOC107758638,LOC108425247,LOC107741669,LOC107602078,LOC107658619 | coding | downstream | 227709 | 4699682 ~ 4716944 (+) |
| AMCG00009896 | NA | coding | downstream | 539405 | 5011378 ~ 5013330 (+) |
| AMCG00009904 | si:ch211-130m23.3,LOC107589015,LOC107741681,LOC107685246,LOC107561624,LOC108426230 | coding | downstream | 670030 | 5142003 ~ 5144936 (+) |
| G76186 | NA | non-coding | upstream | 93110 | 4253237 ~ 4253554 (+) |
| G76168 | NA | non-coding | upstream | 451845 | 3891161 ~ 3894819 (+) |
| G76163 | NA | non-coding | upstream | 549656 | 3796551 ~ 3797008 (+) |
| G76105 | NA | non-coding | upstream | 743059 | 3538497 ~ 3603605 (+) |
| G76077 | NA | non-coding | upstream | 925838 | 3420612 ~ 3420826 (+) |
| G76266 | NA | non-coding | downstream | 686415 | 5158388 ~ 5228786 (+) |
| G76346 | NA | non-coding | downstream | 990550 | 5462523 ~ 5462811 (+) |
| G76408 | NA | non-coding | downstream | 1272284 | 5744257 ~ 5751212 (+) |
| G76417 | NA | non-coding | downstream | 1298282 | 5770255 ~ 5771092 (+) |
| G76418 | NA | non-coding | downstream | 1299701 | 5771674 ~ 5771949 (+) |
| AMCG00009863 | NA | other | upstream | 1578156 | 2752260 ~ 2768508 (+) |
| AMCG00009852 | NA | other | upstream | 2923542 | 1409180 ~ 1423122 (+) |
| AMCG00009851 | NA | other | upstream | 2977849 | 1360536 ~ 1368815 (+) |
| G75807 | NA | other | upstream | 3011614 | 1333967 ~ 1335050 (+) |
| AMCG00009844 | NA | other | upstream | 3019071 | 1322618 ~ 1327593 (+) |
| AMCG00009898 | tmem167a | other | downstream | 438997 | 4910970 ~ 4920884 (+) |
| AMCG00009897 | NA | other | downstream | 760659 | 5232632 ~ 5248181 (+) |
| AMCG00009915 | NA | other | downstream | 1294364 | 5766337 ~ 5769052 (+) |
| AMCG00009929 | sv2c,LOC107755746,LOC107748435,LOC107565680 | other | downstream | 1587269 | 6059242 ~ 6085806 (+) |
| AMCG00009959 | NA | other | downstream | 2570624 | 7042597 ~ 7062734 (+) |
