AMCG00009905


Basic Information

Item Value
gene id AMCG00009905
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 5458286 ~ 5459884 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009905
ATGGAGGATGCGATGGAAGTGCGCACGGACGGTAACTCCCTGCTGAAGGCCGTCTACTTGAGCAGGCTACGTCTGACCCGGCTGCTCCTGGAGGGGGGCGCCTACATCAACGAGAGCAACGACCGTGGGGAGACCCCCCTGATGATCGCCTGCAAGACCAAGCACTCAGACCAGCAGAGTGTGAGCAAGGCCAAGATGGTCAAGTACCTGCTGGAGAACAACGCCGACCCCAACATCCAGGACAAGTCAGGGAAGACGGCGCTGATGCACGCCTGTCTAGAGCGGGCTGGGGTGGAGGTGGTATCCCTGCTGTTGAAAAGCGGGGCTGACCCCAGCCTGGAGGACCACTCCGGCTGCTCCGCCCTGGTCTATGCCGTCAACTCCGATGACAAGGAGACGCTGAAGGTCCTGCTGGATGCCTGCAAGGCGCGGGGGAAAGAggtcatcatcatcaccacaGACAAGCTGCCCTCAGGGAGGCAGATGACCAAGCAGTACCTGAATGTGCCCCCTCCTACAGATCTGGAGGACCGCCACTCCGGGTTGCCCTGCATGTCCCCCTCTGAGATCGAACTCAGAACATCCCCGGTGGCCACCGCTGCCACTGACTCTGTGAAGCACATCTTCAGCTTCAAGGACCAGGGCTCTCACTCCAACACCAGCTCTCAGCCAGGCTCTCCTACCAGGAAGCCCAGTCCTTCCCGAGGGGGGGTGGCCAAACTGCTGCACTTGCAAAGGCTGCACTCTGAGCCCTGGCTGAAGATCCCGCCCTCGCTGTTACTGCAGCAGAACAAAGCCACCTCCCTGAACGAAGACCTGCCGGATATCACCCCTGAGGAAGAGCTGTCCCTCAAGATCAACGGTCTGCCGTTCCCCAAGGCCTGCATCACCCGCCACCAGAGCATCGACGTGAAAGATGCTGGAGGCCTGAGCAAGTCCTTTGAGCAGGCGCCAGGCTGTGGTGGGGGCATGTCCCGGAAGATGTCCTACGACGAGATATCCTCGGCCCACTCTGCCTCGCACCCAGACATCAGTCGCAACTGCAGTGCCATTCCTGTGGACAAGGACCCCGACTCCATCCAGAACCTGGCTGTGTCCAGCCTGAGAAACATTGTGCAGAGGAGGAACATCGGAATGGACCACTACAGCTCAGACTCCCAGCTGCCCCTGTACACCAGCCACACAGAGGACAGCAAAGGCCTCTTGGAGAAGAAAAAGCTCATCTCAATGCACTCCTCCACACTGTCTGGATCGAGGGAGTCTCTGGAGAGCGTATCTGTGGCTCACGTGGCACGGAGGAACACAGGGATGCTGGAGCGCAGAGGATCGGGAGCCTTGCTCTTGGATCACATTGCCCACACCCGTCCAGGATACCTCCCCCCTCTAAACCCTCACCATCCCATCCCAGACATTGGGGCCAACAACAATAATAGCAACAAGCCCAGCGGCGCCATCTCTGGAGGCCCCAAACCCCTCATCCCCTCAGCCCCCACCTTCCCCAAGGATCTCAAAGCAAAGAAGATGCTGCTGCGGCGACACTCCATGCAGACCGAGCAGATCAAGCAGCTGGTCAACTTTGAGCAGATTTTTGGACATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009905 True 1599 mRNA 0.59 1 5458286 5459884

Neighbor

gene id symbol gene type direction distance location
AMCG00009906 NA coding upstream 9967 5438467 ~ 5448319 (+)
AMCG00009904 si:ch211-130m23.3,LOC107589015,LOC107741681,LOC107685246,LOC107561624,LOC108426230 coding upstream 313350 5142003 ~ 5144936 (+)
AMCG00009896 NA coding upstream 444956 5011378 ~ 5013330 (+)
AMCG00009888 hapln1b,LOC107758638,LOC108425247,LOC107741669,LOC107602078,LOC107658619 coding upstream 741342 4699682 ~ 4716944 (+)
AMCG00009891 NA coding upstream 979563 4477621 ~ 4478723 (+)
AMCG00009909 NA coding downstream 49200 5509084 ~ 5525562 (+)
AMCG00009911 NA coding downstream 103091 5562975 ~ 5594007 (+)
AMCG00009914 NA coding downstream 135554 5595438 ~ 5602983 (+)
AMCG00009916 LOC103362416,LOC106953753 coding downstream 257814 5717698 ~ 5744142 (+)
AMCG00009919 NA coding downstream 326541 5786425 ~ 5794926 (+)
G76266 NA non-coding upstream 229500 5158388 ~ 5228786 (+)
G76186 NA non-coding upstream 1204732 4253237 ~ 4253554 (+)
G76168 NA non-coding upstream 1563467 3891161 ~ 3894819 (+)
G76163 NA non-coding upstream 1661278 3796551 ~ 3797008 (+)
G76105 NA non-coding upstream 1854681 3538497 ~ 3603605 (+)
G76346 NA non-coding downstream 2639 5462523 ~ 5462811 (+)
G76408 NA non-coding downstream 284373 5744257 ~ 5751212 (+)
G76417 NA non-coding downstream 310371 5770255 ~ 5771092 (+)
G76418 NA non-coding downstream 311790 5771674 ~ 5771949 (+)
G76434 NA non-coding downstream 316072 5775956 ~ 5776174 (+)
AMCG00009897 NA other upstream 210105 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 537402 4910970 ~ 4920884 (+)
AMCG00009863 NA other upstream 2689778 2752260 ~ 2768508 (+)
AMCG00009852 NA other upstream 4035164 1409180 ~ 1423122 (+)
AMCG00009851 NA other upstream 4089471 1360536 ~ 1368815 (+)
AMCG00009915 NA other downstream 306453 5766337 ~ 5769052 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other downstream 599358 6059242 ~ 6085806 (+)
AMCG00009959 NA other downstream 1582713 7042597 ~ 7062734 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 4843042 10302926 ~ 10313486 (+)
G77423 NA other downstream 5689742 11149626 ~ 11155469 (+)

Expression


Co-expression Network