AMCG00009909


Basic Information

Item Value
gene id AMCG00009909
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 5509084 ~ 5525562 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009909
TAATAATTCAAGAGTCAGTCAGGGAATTTCAGAAGTTGATTCCGGTActgttaataattacatttccgGAAAGTTATCTTTGTAATTCCTAAACAAAACACTTCTCGTGTCCAGTTAATGCTAAGAGAGATCAGCAGGACTGGATTCATTCCGACACTATAAAAGCTTTGAGATACTTGTGATAGACACTCCAAGGAAGCTAAAGGggctaaagaaaaaaaacaaaatgAGGGTGCTGTGGGCTTTGCCATTGTTCAGTGTGTTGCTGCTAGACGCCGTTGTGATGCTCTCCGCGGTGGAGACTCCAATCTGCCTGCAGGGGCCCCCAGGATCCCCCGGACTGCCAGGGCCACAAGGGAGAGACGGCAGAGATGCTGCCCTTTGCTCGAAGGGGGAGAAAGGGGACCCAGTAAAGGGGCTCTATTTCTTCACGTACCACTTTACGTGTTATCAAAAGGATGTGTGGGTGACGCTAAGGAAGAATGCGGACATCGTCCAGTTCACTTTCATGAACCATCTTCAGAACACCGTGCAGTCGTCGGGCTCGGCGGTTGTGCCCCTGGCCTCTGACGACGAGAGGATCAGTGCCGAGGGTACACATTCAGCGGGACAGAAAGAAGACGACAACAGCGAGCGCGATGTTTTGTCGAAACCAGACGACCAGGGCTACGGTGGCCAGGGGCTCAGCCTTGGAAATGGAGATCCGGCGGGGGAAGTTCAGACGGAGCATATTCCTGGACACGCTGCAGGTGAAGTGCACTGGGCAGACTGGGCAGACTGGGCAGAAAAGCGACTTCTGGGGTCAGACCCGAGTGGGGGTGTGGGAATCAAACAAACCACGCGTTTAGATGTTGGCTGTGATTTCTGCTACATATGGATACTGACTCAATGGGAACTTCAGGAGTTTAGCAACCTGTTCCAATGTGGGGTGATTGTGCTGGTCAGCTTTTCCCTGGCTGTGGTGGAAAGCGCTGGGCAGAGCAGGGCAGAGCCAGCTCGAGGAATGATTGAATCAGCCCAGCTTAAAACGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009909 True 1033 mRNA 0.52 6 5509084 5525562

Neighbor

gene id symbol gene type direction distance location
AMCG00009905 NA coding upstream 49200 5458286 ~ 5459884 (+)
AMCG00009906 NA coding upstream 60765 5438467 ~ 5448319 (+)
AMCG00009904 si:ch211-130m23.3,LOC107589015,LOC107741681,LOC107685246,LOC107561624,LOC108426230 coding upstream 364148 5142003 ~ 5144936 (+)
AMCG00009896 NA coding upstream 495754 5011378 ~ 5013330 (+)
AMCG00009888 hapln1b,LOC107758638,LOC108425247,LOC107741669,LOC107602078,LOC107658619 coding upstream 792140 4699682 ~ 4716944 (+)
AMCG00009911 NA coding downstream 37413 5562975 ~ 5594007 (+)
AMCG00009914 NA coding downstream 69876 5595438 ~ 5602983 (+)
AMCG00009916 LOC103362416,LOC106953753 coding downstream 192136 5717698 ~ 5744142 (+)
AMCG00009919 NA coding downstream 260863 5786425 ~ 5794926 (+)
AMCG00009923 ube2r2 coding downstream 364718 5890280 ~ 5894977 (+)
G76346 NA non-coding upstream 46273 5462523 ~ 5462811 (+)
G76266 NA non-coding upstream 280298 5158388 ~ 5228786 (+)
G76186 NA non-coding upstream 1255530 4253237 ~ 4253554 (+)
G76168 NA non-coding upstream 1614265 3891161 ~ 3894819 (+)
G76163 NA non-coding upstream 1712076 3796551 ~ 3797008 (+)
G76408 NA non-coding downstream 218695 5744257 ~ 5751212 (+)
G76417 NA non-coding downstream 244693 5770255 ~ 5771092 (+)
G76418 NA non-coding downstream 246112 5771674 ~ 5771949 (+)
G76434 NA non-coding downstream 250394 5775956 ~ 5776174 (+)
G76460 NA non-coding downstream 371748 5897310 ~ 5900982 (+)
AMCG00009897 NA other upstream 260903 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 588200 4910970 ~ 4920884 (+)
AMCG00009863 NA other upstream 2740576 2752260 ~ 2768508 (+)
AMCG00009852 NA other upstream 4085962 1409180 ~ 1423122 (+)
AMCG00009851 NA other upstream 4140269 1360536 ~ 1368815 (+)
AMCG00009915 NA other downstream 240775 5766337 ~ 5769052 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other downstream 533680 6059242 ~ 6085806 (+)
AMCG00009959 NA other downstream 1517035 7042597 ~ 7062734 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 4777364 10302926 ~ 10313486 (+)
G77423 NA other downstream 5624064 11149626 ~ 11155469 (+)

Expression


Co-expression Network