Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009949 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 6684767 ~ 6685849 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009949 | True | 870 | mRNA | 0.64 | 2 | 6684767 | 6685849 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009945 | bhmt,LOC105015174 | coding | upstream | 14281 | 6665690 ~ 6670486 (+) |
| AMCG00009940 | scamp1,LOC107599399 | coding | upstream | 145857 | 6530064 ~ 6538910 (+) |
| AMCG00009935 | pde8b,LOC106568179,LOC106563036,LOC106928739 | coding | upstream | 399776 | 6249900 ~ 6284991 (+) |
| AMCG00009934 | NA | coding | upstream | 443200 | 6225536 ~ 6241567 (+) |
| AMCG00009936 | s100z,LOC107663035,LOC107720888 | coding | upstream | 499378 | 6180403 ~ 6185389 (+) |
| AMCG00009948 | NA | coding | downstream | 14571 | 6700420 ~ 6724635 (+) |
| AMCG00009953 | NA | coding | downstream | 111080 | 6796929 ~ 6810324 (+) |
| AMCG00009955 | NA | coding | downstream | 125215 | 6811064 ~ 6814174 (+) |
| AMCG00009952 | NA | coding | downstream | 128433 | 6814282 ~ 6833737 (+) |
| AMCG00009954 | NA | coding | downstream | 172583 | 6858432 ~ 6877987 (+) |
| G76555 | NA | non-coding | upstream | 516459 | 6167611 ~ 6168308 (+) |
| G76550 | NA | non-coding | upstream | 518152 | 6161456 ~ 6166615 (+) |
| G76486 | NA | non-coding | upstream | 733947 | 5947878 ~ 5950820 (+) |
| G76484 | NA | non-coding | upstream | 738714 | 5945706 ~ 5946053 (+) |
| G76460 | NA | non-coding | upstream | 783785 | 5897310 ~ 5900982 (+) |
| G76658 | NA | non-coding | downstream | 56083 | 6741932 ~ 6742239 (+) |
| G76659 | NA | non-coding | downstream | 68672 | 6754521 ~ 6754936 (+) |
| G76663 | NA | non-coding | downstream | 104917 | 6790766 ~ 6792207 (+) |
| G76770 | NA | non-coding | downstream | 489630 | 7175479 ~ 7231357 (+) |
| G76799 | NA | non-coding | downstream | 584986 | 7270835 ~ 7271745 (+) |
| AMCG00009929 | sv2c,LOC107755746,LOC107748435,LOC107565680 | other | upstream | 598961 | 6059242 ~ 6085806 (+) |
| AMCG00009915 | NA | other | upstream | 915715 | 5766337 ~ 5769052 (+) |
| AMCG00009897 | NA | other | upstream | 1436586 | 5232632 ~ 5248181 (+) |
| AMCG00009898 | tmem167a | other | upstream | 1763883 | 4910970 ~ 4920884 (+) |
| AMCG00009863 | NA | other | upstream | 3916259 | 2752260 ~ 2768508 (+) |
| AMCG00009959 | NA | other | downstream | 356748 | 7042597 ~ 7062734 (+) |
| AMCG00010021 | hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 | other | downstream | 3617077 | 10302926 ~ 10313486 (+) |
| G77423 | NA | other | downstream | 4463777 | 11149626 ~ 11155469 (+) |
| AMCG00010041 | NA | other | downstream | 4604054 | 11289903 ~ 11389245 (+) |
| G77541 | NA | other | downstream | 5014857 | 11700706 ~ 11701081 (+) |
