AMCG00009970


Basic Information

Item Value
gene id AMCG00009970
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 7638579 ~ 7642526 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009970
GAGAACTTTTAGTTTTGACTGAGGGAGCGGGGCCTGAGATAAGATAACTTGCTCTATAGTAAAAGGTAATCTGAGGAAACACCATGACCTCCACCTACACAACCCTCTCTACCGGGCAGAGGATGCCCCTCATAGGACTAGGAACCTGGAAGAGTCTTCCTGGGCAGGTGAAGCAGGCTGTGCTGATTGCCCTGGACTCTGGATACAGGCACATTGACTGTGCAGCTGCCTATGGCAACGAACAGGAAGTGGGACAGGCCATGTGGGAGAGAATCGGGCCAGAGAAGCTCATTAAAAGGGAAGATGTCTTTGTGACCTCGAAGCTGTGGAACACTAAGCACCACCCTGAAGACGTGGAGCCCGCCTGCAAGAAGAGCCTCGCCGACCTCGGCTTACACTACCTGGACCTTTACCTAATGCACTGGCCCATGGCCTTCCAGAGGGGGGATGAGGTGATGCCAAGAAGGGAAGATGGAACAATACAATATGCTGACACTCACTACAGGGACACCTGGAAGGCAATGGAACAACTGGTGGACAAAGGTCTGGTCAAGGCCATTGGACTGTCCAACTTCAATGCCAAGCAAACTGATGAAATCCTGAGGATCTGTAGACACAAGCCTGTGGTGAACCAGGTTGAATGCCACCCCTACTTGACTCAGAAGCAGCTCCTGACTCACTGCCATGATCGTGGGGTAGCCCTGACTGCTTACAGCCCCTTGGGGTCCCCTGACCGGCCCTGGGCTACCCCCGGGGAACCCCAACTGCTGAATGACCCCCAAATACTTGCCATCGCAGGCCAGTACGGCAAAACACCTGCACAGGTCCTCATAAGGTGGCAAGTACAGAGAGGCATCATCTGCATTCCCAAGAGTGTAACCCAGTATAGGATCCAGCAGAATATTCAGGTATTTGACTTCAAACTGTCGGAATATGACATGAAGCAGATTGAATCCTTTAACCGAAATGAAAGGCTTATAGCTCCCACCATAGAGACAGGTGGTCAGAAAGTGTGGCGAGATGCGGGTCACACCCACTTCCCCTTCCATGACCCTTACTAATGGACACATCAGCTTTCATCGCTGAACAACATGTGAAACCAGAAGTTTATTTACAGTCATGGCattattcctttcttttttttttatctggtatACAAATTCAAGTACTAGTGGAATAACTCCAACATATCTCCCTGCAATGTGCAACCTCTTATCATCAGAATCTTAGGAATTTGTCTTTTCTAGTCTCCAAGATAAATATTCTATTTCCAAACACCTGTCTAATAAATATAGATCTACACACTTCA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0008106 alcohol dehydrogenase (NADP+) activity molecular_function

KEGG:

id description
K00002 AKR1A1, adh; alcohol dehydrogenase (NADP+)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009970 True 1309 mRNA 0.49 9 7638579 7642526

Neighbor

gene id symbol gene type direction distance location
AMCG00009969 dnajb5,LOC107746810,LOC107681063,LOC107708641 coding upstream 6727 7614936 ~ 7631852 (+)
AMCG00009971 NA coding upstream 50333 7562494 ~ 7588246 (+)
AMCG00009973 NA coding upstream 85928 7531887 ~ 7552651 (+)
AMCG00009967 riok2 coding upstream 110577 7519893 ~ 7528002 (+)
AMCG00009961 NA coding upstream 345677 7291064 ~ 7292902 (+)
AMCG00009972 NA coding downstream 1009 7643535 ~ 7644943 (+)
AMCG00009976 eef2l2,LOC108255789,LOC108414462,LOC107681082,LOC107746808,LOC107676651,LOC107552597,LOC107708638 coding downstream 32038 7674564 ~ 7688493 (+)
AMCG00009980 NA coding downstream 218625 7861151 ~ 7869890 (+)
AMCG00009979 NA coding downstream 240108 7882634 ~ 7888072 (+)
AMCG00009984 zfr,LOC107681158,LOC107746805,LOC103397483 coding downstream 361311 8003837 ~ 8029681 (+)
G76827 NA non-coding upstream 203032 7434656 ~ 7435547 (+)
G76807 NA non-coding upstream 351180 7280976 ~ 7287399 (+)
G76799 NA non-coding upstream 366834 7270835 ~ 7271745 (+)
G76770 NA non-coding upstream 407222 7175479 ~ 7231357 (+)
G76663 NA non-coding upstream 846372 6790766 ~ 6792207 (+)
G76863 vcp,LOC107602017,LOC107552546,LOC107676650,LOC107708640,LOC107681079,LOC107393925 non-coding downstream 6964 7649490 ~ 7650191 (+)
G76864 NA non-coding downstream 9196 7651722 ~ 7652831 (+)
G76935 NA non-coding downstream 246957 7889483 ~ 7894390 (+)
G77012 NA non-coding downstream 671590 8314116 ~ 8317675 (+)
G77028 NA non-coding downstream 795981 8438507 ~ 8438786 (+)
AMCG00009959 NA other upstream 575845 7042597 ~ 7062734 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 1552773 6059242 ~ 6085806 (+)
AMCG00009915 NA other upstream 1869527 5766337 ~ 5769052 (+)
AMCG00009897 NA other upstream 2390398 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 2717695 4910970 ~ 4920884 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 2660400 10302926 ~ 10313486 (+)
G77423 NA other downstream 3507100 11149626 ~ 11155469 (+)
AMCG00010041 NA other downstream 3647377 11289903 ~ 11389245 (+)
G77541 NA other downstream 4058180 11700706 ~ 11701081 (+)
AMCG00010101 NA other downstream 7349393 14991919 ~ 15032181 (+)

Expression


Co-expression Network