AMCG00009972


Basic Information

Item Value
gene id AMCG00009972
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 7643535 ~ 7644943 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009972
ATGTCGCTGGATTTAACAGCTGCGTCCGAAATCCCAGCATCTTTCAGCGCCAGTTTCCCCATCCCGGCCTTGACGCTGCTCGTCCTGCTGCTCATTCCGTGCgtcgtgctgctgctgctgctcaacTGCCTGATCCTGGGCTACAAATTATTCAACTTCAAGAAGAAACGGCGGAAAAGGCGACGGCTGAGACTCTCCGACAGCTCGTTTTCCATATCGACGCCCTCCACCCGGCACAGCCGCGTCTCGAAGCACACGGAGATGCCGCCTTTTGACAACCAGGGTGGGAGGATGGAAGCGGGGTCGGTGTCGGCAAAGCCCGTGTCGTCGTCCGCGCACCGGGACGCAGCGGGGCAGAGACTGAGGGTTTGCCGGCCTGATGGGACTACAGGAGAGGGGTCCGGCACTCTGAGAGCAGCCAGCACCATCAGGGCCGCGCTGTCCACGTCtgcctccaccacccgagccgaGCTGCCCCGCAGGCCGCACGCCGTCCCGCAGGGATCCTCGGACTGGCGCAGAGGCGGCCCGCTGTCCAGCGACTCGGAGGCGGACCGTGCCGACAACGTGCCCCCCAATTCGCCGGCCACCATGTTGCTGACACCGTTGGACATGTTACACAGGGGGCATATCCGCCGCAGCAGCACCATGGAGCTACAGAACGAAAGGCACCAGAGGATTCGGAGCCCCATGGAGGCGATGGACTTCCACTATGCCAGCAGCATCCCTCAAGAGGGGTCGAGGGTCGTCACTTCAGCCAGCTCCTCCAGCCTGGGACCTGGACTGGACAGTGATTTTGGAGCCAGCGCCGGGATTTCTCTGCGGATCTTGTCCTCAGACAACGAAGGGTTCCTCAACCCCGTACGGGCATCTGGCCTGGAGTGGGATTACTATGACCCGAGCTTTAAGAGACAAAACCATGTCTACAAACACATGCAGCACCAGTTGCCCCCAGTCGGCACGCAGCAATATTGGGTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009972 True 981 mRNA 0.61 3 7643535 7644943

Neighbor

gene id symbol gene type direction distance location
AMCG00009970 NA coding upstream 1009 7638579 ~ 7642526 (+)
AMCG00009969 dnajb5,LOC107746810,LOC107681063,LOC107708641 coding upstream 11683 7614936 ~ 7631852 (+)
AMCG00009971 NA coding upstream 55289 7562494 ~ 7588246 (+)
AMCG00009973 NA coding upstream 90884 7531887 ~ 7552651 (+)
AMCG00009967 riok2 coding upstream 115533 7519893 ~ 7528002 (+)
AMCG00009976 eef2l2,LOC108255789,LOC108414462,LOC107681082,LOC107746808,LOC107676651,LOC107552597,LOC107708638 coding downstream 29621 7674564 ~ 7688493 (+)
AMCG00009980 NA coding downstream 216208 7861151 ~ 7869890 (+)
AMCG00009979 NA coding downstream 237691 7882634 ~ 7888072 (+)
AMCG00009984 zfr,LOC107681158,LOC107746805,LOC103397483 coding downstream 358894 8003837 ~ 8029681 (+)
AMCG00009985 NA coding downstream 389680 8034623 ~ 8053793 (+)
G76827 NA non-coding upstream 207988 7434656 ~ 7435547 (+)
G76807 NA non-coding upstream 356136 7280976 ~ 7287399 (+)
G76799 NA non-coding upstream 371790 7270835 ~ 7271745 (+)
G76770 NA non-coding upstream 412178 7175479 ~ 7231357 (+)
G76663 NA non-coding upstream 851328 6790766 ~ 6792207 (+)
G76863 vcp,LOC107602017,LOC107552546,LOC107676650,LOC107708640,LOC107681079,LOC107393925 non-coding downstream 4547 7649490 ~ 7650191 (+)
G76864 NA non-coding downstream 6779 7651722 ~ 7652831 (+)
G76935 NA non-coding downstream 244540 7889483 ~ 7894390 (+)
G77012 NA non-coding downstream 669173 8314116 ~ 8317675 (+)
G77028 NA non-coding downstream 793564 8438507 ~ 8438786 (+)
AMCG00009959 NA other upstream 580801 7042597 ~ 7062734 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 1557729 6059242 ~ 6085806 (+)
AMCG00009915 NA other upstream 1874483 5766337 ~ 5769052 (+)
AMCG00009897 NA other upstream 2395354 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 2722651 4910970 ~ 4920884 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 2657983 10302926 ~ 10313486 (+)
G77423 NA other downstream 3504683 11149626 ~ 11155469 (+)
AMCG00010041 NA other downstream 3644960 11289903 ~ 11389245 (+)
G77541 NA other downstream 4055763 11700706 ~ 11701081 (+)
AMCG00010101 NA other downstream 7346976 14991919 ~ 15032181 (+)

Expression


Co-expression Network