AMCG00009973


Basic Information

Item Value
gene id AMCG00009973
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 7531887 ~ 7552651 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009973
ATGGATAGTGTGTTGGATTCTCTGGAAGCGGTCGTGTCCCGGGTGCTCCCCCACACCGACTCGGGCAGCGTGTTCAAGGACTGTAACCATCACATCAGTACATTGAGTCCATCGCTCCTGAGTCTTGACCCATGTGTTGCTTTGGCAGTGAACGTGGTGGGGATGCTGCATGAGTTCTGGGAGAGGAAGCAGGCAGGAGGCGTCCCGGTCCGGCCAGAGAACCTGGTGGTCTATGAGTGCGCCCCCTCACCCAGCCCTCCCTTCATCTGCTACGTCACCCTACCAGGGGGCAGCTGCTTTGGCAATTTACAGTGCTGCTTCACTAAGGCAGAAGCCCGGCGAGATGCAGCCCGCATCGCACTGATGAATTCGATCTTCAACGAGCTTCCCTCTCGTAAAATAACGCAGGAGTTCATCTCTCGCAGCCTGCAGGAGGCCGCCTCTACCACCAGTGGCAGTTTAGGGGACGCCACAGATCCCAGCACAAGCATAGGTGCCTATTGCTTAATGCTGGAGTCAAATGTCGGGAAAACCATGCTGGAGTTCCAGGAGATCATGACAGTTTTCCAGCTCCTGCACTGGAACGGGAGCCTGAAGGTGTTCAGAGAGAAGAAATGCTCTCGCCAGGAAGTCATCTCCTACTACTCCCAGCACCACCTGGATGAGTACACCAGGAGCCACATGGCACTGGACTGGATCTCCAAAGAGCAGGAGGCCCCAGGGCTCATCTCCCAGGAGCTGCAGCTGGCACTGAAGGAGCTGGGGGAGGCCCGCACGGCTGGCCGAGAGCTGCGCTTTTacaaggagaagagagagatccTGAGTCTAGCCCTGAGTCAGCGCTACAATGAAGACGCTGGATCGACCTGCAGTGGGCAGAGCAGCCTGTGTGAGGCACAGTGGAGGGAGCCTCACCCATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009973 True 921 mRNA 0.57 6 7531887 7552651

Neighbor

gene id symbol gene type direction distance location
AMCG00009967 riok2 coding upstream 3885 7519893 ~ 7528002 (+)
AMCG00009961 NA coding upstream 238985 7291064 ~ 7292902 (+)
AMCG00009960 NA coding upstream 327243 7193174 ~ 7204644 (+)
AMCG00009966 NA coding upstream 348652 7182629 ~ 7183235 (+)
AMCG00009958 setbp1,LOC107555500,LOC107756308,LOC107703262 coding upstream 521643 7003003 ~ 7010244 (+)
AMCG00009971 NA coding downstream 9843 7562494 ~ 7588246 (+)
AMCG00009969 dnajb5,LOC107746810,LOC107681063,LOC107708641 coding downstream 62285 7614936 ~ 7631852 (+)
AMCG00009970 NA coding downstream 85928 7638579 ~ 7642526 (+)
AMCG00009972 NA coding downstream 90884 7643535 ~ 7644943 (+)
AMCG00009976 eef2l2,LOC108255789,LOC108414462,LOC107681082,LOC107746808,LOC107676651,LOC107552597,LOC107708638 coding downstream 121913 7674564 ~ 7688493 (+)
G76827 NA non-coding upstream 96340 7434656 ~ 7435547 (+)
G76807 NA non-coding upstream 244488 7280976 ~ 7287399 (+)
G76799 NA non-coding upstream 260142 7270835 ~ 7271745 (+)
G76770 NA non-coding upstream 300530 7175479 ~ 7231357 (+)
G76663 NA non-coding upstream 739680 6790766 ~ 6792207 (+)
G76859 NA non-coding downstream 63307 7615958 ~ 7648166 (+)
G76863 vcp,LOC107602017,LOC107552546,LOC107676650,LOC107708640,LOC107681079,LOC107393925 non-coding downstream 96839 7649490 ~ 7650191 (+)
G76864 NA non-coding downstream 99071 7651722 ~ 7652831 (+)
G76935 NA non-coding downstream 336832 7889483 ~ 7894390 (+)
G77012 NA non-coding downstream 761465 8314116 ~ 8317675 (+)
AMCG00009959 NA other upstream 469153 7042597 ~ 7062734 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 1446081 6059242 ~ 6085806 (+)
AMCG00009915 NA other upstream 1762835 5766337 ~ 5769052 (+)
AMCG00009897 NA other upstream 2283706 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 2611003 4910970 ~ 4920884 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 2750275 10302926 ~ 10313486 (+)
G77423 NA other downstream 3596975 11149626 ~ 11155469 (+)
AMCG00010041 NA other downstream 3737252 11289903 ~ 11389245 (+)
G77541 NA other downstream 4148055 11700706 ~ 11701081 (+)
AMCG00010101 NA other downstream 7439268 14991919 ~ 15032181 (+)

Expression


Co-expression Network