AMCG00010012


Basic Information

Item Value
gene id AMCG00010012
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 9672221 ~ 9688099 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010012
ATGTTGCTCCCATCCGCCAAACGTGCGCGTCCCTCTCCGCACTCGGCGCTGGTCTCGTCTGCAAAACTGTTGCGACTGTCGATTACAGTCATGAAGGACAGACGGGGAGAGGACGCGACACCCCGCAGCGGCGGTACCCCGGCCGCGGTCTTGTTTCTGGCTCTGTTCGTGGGATCCTCCTGCGGAGCCGAGGACGCGTCCTGCCACGGAGCCTTCGACCTCTACTTTGTACTGGACCGCTCTGGCAGCGTGGCAGAAAACTGGCCTGAAATTTATGGCTTCGTTAAGCAGCTCACGGACAGATTTGTGAGcCCAAGGATGAGATTATCTTTCATAGTTTTCTCATCAAGTGCTGAAGTCCTATTGCCTCTTACTGGGGACAGaaatgaaattgaaaaaggCCTGCAAAGATTAAGTGCAGTGAAGCCTGCAGGTGAAACATTTATGCATGATGGAATAACGAAGGCATTAGACCAAATACAAGCTCAAGGTTCGAGAACATCCAGCATTATTATTGCTTTGACGGATGGAAAGCTGGAGGGATTTCTGCTCACACTTGCACAAGATGAAGCTGAAAAGGCGAGGTCCGTCGGTGCACGAGTTTACTGTGTTGGTGTTAAAGATTTTGAAGAGTCAGAGcTTGAATCAATTGCTGACACCAAAGATCAAGTATTCCCTGTCACAGATGGCTTCCATGCCCTCAAAGGCATAATAAACTCTatttTAAAGCAGTCCTGCACAGAAATTTTAACCGTTGAGCCTTCAGCCATCTGTGTTAACGTCTGCCTCCATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010012 True 795 mRNA 0.49 10 9672221 9688099

Neighbor

gene id symbol gene type direction distance location
AMCG00010006 prkg2,LOC103134980 coding upstream 258088 9392881 ~ 9414133 (+)
AMCG00010007 rasgef1b,rasgef1ba,LOC107663389 coding upstream 296477 9360116 ~ 9375744 (+)
AMCG00010005 NA coding upstream 321910 9347026 ~ 9350311 (+)
AMCG00010002 cds1,LOC107602031,LOC107744867,LOC107663388 coding upstream 468122 9178039 ~ 9204099 (+)
AMCG00010003 wdfy3 coding upstream 500573 9073241 ~ 9171648 (+)
AMCG00010013 antxr2 coding downstream 2474 9690573 ~ 9713280 (+)
AMCG00010014 LOC106570899,LOC108433513,LOC107713330,LOC102780134 coding downstream 225943 9914042 ~ 9919171 (+)
AMCG00010017 smad2,LOC107743055,LOC108235010 coding downstream 457454 10145553 ~ 10154362 (+)
AMCG00010020 NA coding downstream 603875 10291974 ~ 10299643 (+)
AMCG00010025 NA coding downstream 645121 10333220 ~ 10359574 (+)
G77207 NA non-coding upstream 110415 9561309 ~ 9561806 (+)
G77201 NA non-coding upstream 154209 9517658 ~ 9518012 (+)
G77198 NA non-coding upstream 240592 9429243 ~ 9431629 (+)
G77192 NA non-coding upstream 252851 9416430 ~ 9419370 (+)
G77135 NA non-coding upstream 320351 9351591 ~ 9351870 (+)
G77233 NA non-coding downstream 53690 9741789 ~ 9743100 (+)
G77253 NA non-coding downstream 186769 9874868 ~ 9940435 (+)
G77255 NA non-coding downstream 234622 9922721 ~ 9926110 (+)
G77285 fras1 non-coding downstream 308255 9996354 ~ 9997885 (+)
G77346 NA non-coding downstream 627247 10315346 ~ 10316098 (+)
AMCG00009959 NA other upstream 2609487 7042597 ~ 7062734 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 3586415 6059242 ~ 6085806 (+)
AMCG00009915 NA other upstream 3903169 5766337 ~ 5769052 (+)
AMCG00009897 NA other upstream 4424040 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 4751337 4910970 ~ 4920884 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 614827 10302926 ~ 10313486 (+)
G77423 NA other downstream 1461527 11149626 ~ 11155469 (+)
AMCG00010041 NA other downstream 1601804 11289903 ~ 11389245 (+)
G77541 NA other downstream 2012607 11700706 ~ 11701081 (+)
AMCG00010101 NA other downstream 5303820 14991919 ~ 15032181 (+)

Expression


Co-expression Network