AMCG00010013 (antxr2)


Basic Information

Item Value
gene id AMCG00010013
gene name antxr2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 9690573 ~ 9713280 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010013
ATGTCAATGGATTCATTGTGCAGCATCATCTGGAATGACAGCTGCCGGGGGAAGAGCATTGGCATTCCTCACATCCAGtctgACGGTACAGCTGTGGCCATTGTGTTCCTGGTGCTGTTCCTCCTGCTTGCACTGCTGCTCATGTGGTGGTTTTGGCCCCTGTGCTGTACCCTGgtgATTAAAGACCCACCCCCACCTCCGCCACCAGCTCCAATACCGGAACCAGAAGAGGACCCATTGCCTAAGAAAAAGTGGCCCACTGTGGATGCTTCTTACTATGGGGGAAGAGGAGCTGGTGGTATAAAGAGAATGGAGGTTCGCTGGGGTGAAAAGGGATCCACCGAAGAAGGGGCGAGATTAGAGAAAGCCAAGAATGCTGTAGTGCATGTACCGGAAGATGTGGAAGAGCCAATGACACGCAAATCTCCAAGAGCTGCCCCCGTCCACCAGCCATCTGAATCAAAATGGTACACCCCTATTAAGGGCCGTCTGGATGCTCTGTGGGCACTGCTGCGGAGGCAGTATGATCGAGTTTCCCTCATGCGACCACAGGCGGAAGATGAGACGGGGGAGCGAGAGAGGCACTTCAGAGCCAACTTAACGCGGCAACATCTGCCGCCAAGTTTCCAGGGAGCGGCTGGGGACAGCAGGAGTGTAAACCAGCCTGTGTACACTGCGTCCTCGTCCTGGGGCTTACTGGACAAACTGTGCCGCCTGAGACAGAAAAAATAG

Function

symbol description
antxr2 Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in toxin transport. Predicted to act upstream of or within reproductive process. Predicted to be located in external side of plasma membrane. Predicted to be active in cell surface and plasma membrane. Implicated in fibroma and hyaline fibromatosis syndrome.

NR:

description
PREDICTED: anthrax toxin receptor 2

GO:

id name namespace
GO:0000132 establishment of mitotic spindle orientation biological_process
GO:0005768 endosome cellular_component
GO:0030496 midbody cellular_component
GO:0005886 plasma membrane cellular_component
GO:0032154 cleavage furrow cellular_component
GO:0070938 contractile ring cellular_component
GO:0030864 cortical actin cytoskeleton cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010013 True 732 mRNA 0.55 8 9690573 9713280

Neighbor

gene id symbol gene type direction distance location
AMCG00010012 NA coding upstream 2474 9672221 ~ 9688099 (+)
AMCG00010006 prkg2,LOC103134980 coding upstream 276440 9392881 ~ 9414133 (+)
AMCG00010007 rasgef1b,rasgef1ba,LOC107663389 coding upstream 314829 9360116 ~ 9375744 (+)
AMCG00010005 NA coding upstream 340262 9347026 ~ 9350311 (+)
AMCG00010002 cds1,LOC107602031,LOC107744867,LOC107663388 coding upstream 486474 9178039 ~ 9204099 (+)
AMCG00010014 LOC106570899,LOC108433513,LOC107713330,LOC102780134 coding downstream 200762 9914042 ~ 9919171 (+)
AMCG00010017 smad2,LOC107743055,LOC108235010 coding downstream 432273 10145553 ~ 10154362 (+)
AMCG00010020 NA coding downstream 578694 10291974 ~ 10299643 (+)
AMCG00010025 NA coding downstream 619940 10333220 ~ 10359574 (+)
AMCG00010027 NA coding downstream 698426 10411706 ~ 10412110 (+)
G77207 NA non-coding upstream 128767 9561309 ~ 9561806 (+)
G77201 NA non-coding upstream 172561 9517658 ~ 9518012 (+)
G77198 NA non-coding upstream 258944 9429243 ~ 9431629 (+)
G77192 NA non-coding upstream 271203 9416430 ~ 9419370 (+)
G77135 NA non-coding upstream 338703 9351591 ~ 9351870 (+)
G77233 NA non-coding downstream 28509 9741789 ~ 9743100 (+)
G77253 NA non-coding downstream 161588 9874868 ~ 9940435 (+)
G77255 NA non-coding downstream 209441 9922721 ~ 9926110 (+)
G77285 fras1 non-coding downstream 283074 9996354 ~ 9997885 (+)
G77346 NA non-coding downstream 602066 10315346 ~ 10316098 (+)
AMCG00009959 NA other upstream 2627839 7042597 ~ 7062734 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 3604767 6059242 ~ 6085806 (+)
AMCG00009915 NA other upstream 3921521 5766337 ~ 5769052 (+)
AMCG00009897 NA other upstream 4442392 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 4769689 4910970 ~ 4920884 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 589646 10302926 ~ 10313486 (+)
G77423 NA other downstream 1436346 11149626 ~ 11155469 (+)
AMCG00010041 NA other downstream 1576623 11289903 ~ 11389245 (+)
G77541 NA other downstream 1987426 11700706 ~ 11701081 (+)
AMCG00010101 NA other downstream 5278639 14991919 ~ 15032181 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031291 antxr2a coding NC_007116.7 CM002889.2 39386225 ~ 39474235 (-)