Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010047 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 11471152 ~ 11473944 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010047 | True | 693 | mRNA | 0.51 | 5 | 11471152 | 11473944 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010050 | NA | coding | upstream | 1368 | 11466925 ~ 11469784 (+) |
| AMCG00010049 | NA | coding | upstream | 5583 | 11458113 ~ 11465569 (+) |
| AMCG00010048 | NA | coding | upstream | 13357 | 11440639 ~ 11457795 (+) |
| AMCG00010043 | NA | coding | upstream | 32148 | 11428559 ~ 11439004 (+) |
| AMCG00010036 | NA | coding | upstream | 226783 | 11215711 ~ 11244369 (+) |
| AMCG00010044 | NA | coding | downstream | 19742 | 11493686 ~ 11516565 (+) |
| AMCG00010045 | rictor,LOC107681152,LOC107589259 | coding | downstream | 46295 | 11520239 ~ 11573201 (+) |
| AMCG00010046 | NA | coding | downstream | 146206 | 11620150 ~ 11636169 (+) |
| AMCG00010052 | NA | coding | downstream | 256536 | 11730480 ~ 11740511 (+) |
| AMCG00010054 | nup155,LOC106563918 | coding | downstream | 372460 | 11846404 ~ 11866799 (+) |
| G77445 | NA | non-coding | upstream | 115790 | 11355091 ~ 11355362 (+) |
| G77395 | NA | non-coding | upstream | 492648 | 10977663 ~ 10978504 (+) |
| G77349 | sigmar1,LOC107573076 | non-coding | upstream | 1138654 | 10330720 ~ 10332498 (+) |
| G77346 | NA | non-coding | upstream | 1155054 | 10315346 ~ 10316098 (+) |
| G77285 | fras1 | non-coding | upstream | 1473267 | 9996354 ~ 9997885 (+) |
| G77517 | NA | non-coding | downstream | 111010 | 11584954 ~ 11586100 (+) |
| G77515 | NA | non-coding | downstream | 117274 | 11591218 ~ 11639790 (+) |
| G77543 | NA | non-coding | downstream | 267704 | 11741648 ~ 11743415 (+) |
| G77621 | NA | non-coding | downstream | 550877 | 12024821 ~ 12025152 (+) |
| G77661 | NA | non-coding | downstream | 674987 | 12148931 ~ 12152321 (+) |
| AMCG00010041 | NA | other | upstream | 81907 | 11289903 ~ 11389245 (+) |
| G77423 | NA | other | upstream | 315683 | 11149626 ~ 11155469 (+) |
| AMCG00010021 | hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 | other | upstream | 1157666 | 10302926 ~ 10313486 (+) |
| AMCG00009959 | NA | other | upstream | 4408418 | 7042597 ~ 7062734 (+) |
| AMCG00009929 | sv2c,LOC107755746,LOC107748435,LOC107565680 | other | upstream | 5385346 | 6059242 ~ 6085806 (+) |
| G77541 | NA | other | downstream | 226762 | 11700706 ~ 11701081 (+) |
| AMCG00010101 | NA | other | downstream | 3517975 | 14991919 ~ 15032181 (+) |
| AMCG00010116 | LOC104924827,LOC102229495,LOC106923526,LOC105930787,LOC102305543 | other | downstream | 4050502 | 15524446 ~ 15534087 (+) |
| AMCG00010119 | NA | other | downstream | 4154401 | 15628345 ~ 15642841 (+) |
| G78198 | NA | other | downstream | 4583587 | 16057531 ~ 16060087 (+) |
