AMCG00010049


Basic Information

Item Value
gene id AMCG00010049
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 11458113 ~ 11465569 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010049
CCCAGCTGGAGTTGCATCCAAAAGCAATAGAGTCGGACAGATTGAGACCATCTTGGATTAACATTCATTCTGCAGTGACGAGGAGCACTTTGAAGCTGAAGGATTCCAGGAGTTTCTTGAAACGAAGGCCAGTCTTAATATGAAACAGAGCTTGGGTTCTAACTGTGAACATGAGAGGAGCCTCTGCAGATTTTTAAACTGGTGCTTCTTAACCTCCTAATGTTTTGCCGTTTAGGGTCGAGCATAGATGCGACAGCTGAAGATGCAGAATCTGTGGGGTTTGTTATTCCTGGTTGCAGTTTGGAACAGTACTCTTGCAGTGAACAGAGAGCGACAAGACCGGCCTCAGGGACTGTTGTCTAGATCACAGCCCTCTGGAAAGCGTGCAGCAGCCAGCAGGAAGGAATCTGTTCCAGATGTCGAGACACAGGAACACAGATCTCCGAATCTGCCCGACACCATGGACCTGGACTTCTTGTCTGGCTTTGCTGGGAAGAATCGCCTGTGGGTCATCACCGCTCCTTCTAGAGCCGATCACTATTTAAGAATGATGGAAAAGCAGATGGAGGAATCGGAAGGGCTGAACTGTCGCCTGGCCGAAAGAGACACCTTCACCATTATTGTCATTCAGAATGCCTTGATGGAGGGCAAGATCAGAAGAACCACTCACCAGGGGGAGGCCACAGAGGAGTTGCTCGATGAGGACACGGTCTCCAAACTGCTACACTATTTGTCCGTATCAGATGGTACATTCAGCATGCTGATTCTGAAGAAGAACTTGAAGGTGGGCGAGCGCTTCCCTTACCCTGTTAGAGTTGAAGCCGTCCTGGAAGCCATTGATGATTTACCTTTACGGAAAGTAGAGAAGCTGACGAGGAGGGGATCTGCTGGAAAGTGCTTAGTTCGGAAAAGGCTAACCCAAAGGAAACTGGGCCACATCCGGAGAGGGGCAAGAGTCTCCAGTCCTTTGAGACAAGGCAACTCCACCACCGTGAGCTTCATGCAGAGGAGGCAGGGGGATAAGAAGTTTGTGCTAAGGAGCAAGATCCAGGACATCTTAAGAGGGAAATCTAGATTTGTGATCCGTAAAAAACCCGGAAGTCCCCAGAAAACACTGCCTCGGCGTGTTCCgtttacaagaacaaaaacgAACATGAGGTTCTTGGTCAGATCTAGGTTGTCAAACTCTACAGTGACTAACCAGATGTCAGGAGTGTTTGGCACTGACTCAGATGAAGTCACAGAAAATGCAAGAACTAACCCTATTCTACCTCCAAAGCAGCAGGTTCGAACAGGTTTATATATTACTACTGCCCCACCAGATGAACGATCAAACACACAGGATGCACACGGTACTGCAGCAAGTGAACAAGAGAAGACAAATCTGTTTGACTCTATTCAAAGGCAGggtcaaaataaaaccaataccAGTTTGGACAAAGCTGATGAAAATACTCCAGGAAGGTCTGGTAAAGGTAAGAAAGGAGAATCCAAGAAACGAGGTAAAGGGAAAAGCAGAGGAGGTAAAAAAAAGGGACGGAGAGGTGGGAAGAAATCTCAGCGGGCAGCAGACAACAGAGCGGTGCTGGGTTTTTTGGAGAATTTCCAAGGTAAAAGGAGACTTCTGATTATTACCACCCCCAGTGCAACAAACCCACTGTATGTCCAGCAAAGGGATGAAAATTTGGAGCACAGCTGTGATCTGGCTTTGAGGAAGATCTCAACTGTGACTGTTCTTGGCTCTGAGCATAACAGCACTCTGCAGCTAGAGCACCATCAACGTgATGATGACCTTCCATTTGACTACCTCGTGGATAAATGCAGTGATCAGGACCTGATTTCACGGCTTCGCAAGGAGTATGGAATGGTCCATAATAAGGATTTTTCTATGGTGCTGACTGACTATGACTTGCAGCAGAAGCAATTCTTTGATGTTCCCATTGCTGTACCACTGATGACGGATTTCATTGACTCATTTCCAACGAGACGGACTGAGGTGGAAATGGAGAAGAAGCATGCTATCTCTTGCCAACCACAAGAGCAAGGCAGTGTGGACACATTACTAACAAGATTTATTTCAAAAAGACGACTTCTGGTCATTTCCAGTCCAACTGAAGATGACTATTCATTCCAGCAACAAGTATTAGCACTGAATGGGCAGGCCTGCTTTCTGGGAATCCGTCATTTTGCTGTACTGAAACTAATAGGTGCGGCAACTAAAGCTTCAGGTTCACTTGAGCTGTTTCCATTAAATGGAAAAAGTCAGTCTGAGAAAGAAGAGCTCTCCCAAGGGGTAGTGGACGGCATCAGGGAGCACTTCAAAATCAGCAAGGAATACTTTTCCATGCTGATGATCGGGAAAGATGGCACCATCAAGTCTTGGTACCCCACCCCGGTCTGGTCTATGGCCATTGTCTATGATCTAGTCAACTCTATGGAGCTCCGGCAGCAGGAGGAGAAGCTACAGAACTCTCTTGGGATCAGCTGCCCAGAGCATCAGGGATACGATGAAAGGGACCATGACAGATACCATTAACACCAGAGCTCCCAGGACTAAAACAACTGGCATTATGTACTTAGTGAGAAGGACTTGTCCACAACGCTTTAACTCACACATGATTAAAAGATATTGTCTCCCTCTATCTCATAAGTTAGGTGTGCAGGCTTCTGGCTGTGCAAACCTTTTTCAGCTGGTAGTTTGATATCGTAACTGGCTTTAAACCACAGATTAATTGATGACAACCCCATGAGGGTAAATGACCTATTCCGTGTCACTTATGAGGTGAATCTATGTGTGTCATGAAATGTACAGGTGTATTACCAACACCCTCTAATCAGATCTCGTGTGTACGCTTCTTTCAGTTTAGAGAATATTGAAGCACTGGCTGCATGTAATCGCATTGTGTGTCATCAAATGTAAAGCTCGAACAAAGATGCATTTGAATATATTGCTATGTGAAAATtcagtaaattaacatttataaatatttgaaaatatagacaACATAACAATGAATATAGGCAACGCATGtaacatttgtatacatttcctgtgaatataatataaaaaggaaaCCTGTATAAAGGATTATTTGAAACCTTTCATAA

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010049 True 3108 mRNA 0.45 7 11458113 11465569

Neighbor

gene id symbol gene type direction distance location
AMCG00010048 NA coding upstream 318 11440639 ~ 11457795 (+)
AMCG00010043 NA coding upstream 19109 11428559 ~ 11439004 (+)
AMCG00010036 NA coding upstream 213744 11215711 ~ 11244369 (+)
AMCG00010037 NA coding upstream 277108 11177092 ~ 11181005 (+)
AMCG00010034 rxfp3,LOC107589282,LOC107681130,LOC107579623,LOC107706441,LOC107750484,LOC107703594 coding upstream 372192 11084680 ~ 11085921 (+)
AMCG00010050 NA coding downstream 1356 11466925 ~ 11469784 (+)
AMCG00010047 NA coding downstream 5583 11471152 ~ 11473944 (+)
AMCG00010044 NA coding downstream 28117 11493686 ~ 11516565 (+)
AMCG00010045 rictor,LOC107681152,LOC107589259 coding downstream 54670 11520239 ~ 11573201 (+)
AMCG00010046 NA coding downstream 154581 11620150 ~ 11636169 (+)
G77445 NA non-coding upstream 102751 11355091 ~ 11355362 (+)
G77395 NA non-coding upstream 479609 10977663 ~ 10978504 (+)
G77349 sigmar1,LOC107573076 non-coding upstream 1125615 10330720 ~ 10332498 (+)
G77346 NA non-coding upstream 1142015 10315346 ~ 10316098 (+)
G77285 fras1 non-coding upstream 1460228 9996354 ~ 9997885 (+)
G77517 NA non-coding downstream 119385 11584954 ~ 11586100 (+)
G77515 NA non-coding downstream 125649 11591218 ~ 11639790 (+)
G77543 NA non-coding downstream 276079 11741648 ~ 11743415 (+)
G77621 NA non-coding downstream 559252 12024821 ~ 12025152 (+)
G77661 NA non-coding downstream 683362 12148931 ~ 12152321 (+)
AMCG00010041 NA other upstream 68868 11289903 ~ 11389245 (+)
G77423 NA other upstream 302644 11149626 ~ 11155469 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other upstream 1144627 10302926 ~ 10313486 (+)
AMCG00009959 NA other upstream 4395379 7042597 ~ 7062734 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 5372307 6059242 ~ 6085806 (+)
G77541 NA other downstream 235137 11700706 ~ 11701081 (+)
AMCG00010101 NA other downstream 3526350 14991919 ~ 15032181 (+)
AMCG00010116 LOC104924827,LOC102229495,LOC106923526,LOC105930787,LOC102305543 other downstream 4058877 15524446 ~ 15534087 (+)
AMCG00010119 NA other downstream 4162776 15628345 ~ 15642841 (+)
G78198 NA other downstream 4591962 16057531 ~ 16060087 (+)

Expression


Co-expression Network