AMCG00010050


Basic Information

Item Value
gene id AMCG00010050
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 11466925 ~ 11469784 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010050
ATGCATACATCTGCTGTAAGGATCCCCACTGCCTCCTGGGGAGCACAGGCCTGGGATCTACAAAGGGCAGAGGACACCAGCAGAAGCAGCGAATGTATTCCAACTGAAAGGTGCAGTCAGGATGGCTTCTCAACGAGAAGTGTCCTTGAACAACCCCGGAGAGATGAGGGAACCCCCTGGGAAGATGCCAGTCGTACCCCAGCGGAGAAACTTGTGAGCACCCGCGCTGCTTGTGAAGAGTTCATTAAAAACCATAAGGTGTCAGAAGCGATGATGGCACTGGTCAGATGTGTCGCTCTCTCCAGGCTGGTGTACGGGGATGGCCACTGGCGTCTGGCGGAGTCATTGGCCAATGTAGCTCATGGATACCTGCAGCTTCGAGAAATTCATCAAATGAGTTTCCTCCTTGACTGTTTTACTCTGACAGAGGCTTTTCAGAACCTTCAAAAGGCAGAGAAGATCTATGGGGAGTATCACCATGTGGGCAATGTGCAAGTCCAGAAGGTCTCTGAGAAAGACCTGGCTCAGGCACTGGGCAGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010050 True 543 mRNA 0.52 4 11466925 11469784

Neighbor

gene id symbol gene type direction distance location
AMCG00010049 NA coding upstream 1356 11458113 ~ 11465569 (+)
AMCG00010048 NA coding upstream 9130 11440639 ~ 11457795 (+)
AMCG00010043 NA coding upstream 27921 11428559 ~ 11439004 (+)
AMCG00010036 NA coding upstream 222556 11215711 ~ 11244369 (+)
AMCG00010037 NA coding upstream 285920 11177092 ~ 11181005 (+)
AMCG00010047 NA coding downstream 1368 11471152 ~ 11473944 (+)
AMCG00010044 NA coding downstream 23902 11493686 ~ 11516565 (+)
AMCG00010045 rictor,LOC107681152,LOC107589259 coding downstream 50455 11520239 ~ 11573201 (+)
AMCG00010046 NA coding downstream 150366 11620150 ~ 11636169 (+)
AMCG00010052 NA coding downstream 260696 11730480 ~ 11740511 (+)
G77445 NA non-coding upstream 111563 11355091 ~ 11355362 (+)
G77395 NA non-coding upstream 488421 10977663 ~ 10978504 (+)
G77349 sigmar1,LOC107573076 non-coding upstream 1134427 10330720 ~ 10332498 (+)
G77346 NA non-coding upstream 1150827 10315346 ~ 10316098 (+)
G77285 fras1 non-coding upstream 1469040 9996354 ~ 9997885 (+)
G77517 NA non-coding downstream 115170 11584954 ~ 11586100 (+)
G77515 NA non-coding downstream 121434 11591218 ~ 11639790 (+)
G77543 NA non-coding downstream 271864 11741648 ~ 11743415 (+)
G77621 NA non-coding downstream 555037 12024821 ~ 12025152 (+)
G77661 NA non-coding downstream 679147 12148931 ~ 12152321 (+)
AMCG00010041 NA other upstream 77680 11289903 ~ 11389245 (+)
G77423 NA other upstream 311456 11149626 ~ 11155469 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other upstream 1153439 10302926 ~ 10313486 (+)
AMCG00009959 NA other upstream 4404191 7042597 ~ 7062734 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 5381119 6059242 ~ 6085806 (+)
G77541 NA other downstream 230922 11700706 ~ 11701081 (+)
AMCG00010101 NA other downstream 3522135 14991919 ~ 15032181 (+)
AMCG00010116 LOC104924827,LOC102229495,LOC106923526,LOC105930787,LOC102305543 other downstream 4054662 15524446 ~ 15534087 (+)
AMCG00010119 NA other downstream 4158561 15628345 ~ 15642841 (+)
G78198 NA other downstream 4587747 16057531 ~ 16060087 (+)

Expression


Co-expression Network