AMCG00010068


Basic Information

Item Value
gene id AMCG00010068
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 12347990 ~ 12359546 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010068
attgttttttcattatcaGTGCGCAATCTCACTGGTTTTAGGACCTTGGCAGGATTAGTGCACGGCGAGGCGTCAGACGCATCATGTGACCGTGCCCAGCCTGCTGTCATGTGCTTTGAGTCTCGCAAGTTTCGCTGCGGCTGTCGACTGTAGTGCAACTTATTTCTGCAGGGAAGcgcatcccatcccatcccatcccatcccatcccatccatTGTATGTCATTATATCACCGTTGCAATGGACTGCGGAATAATAACCTCGAAAACAGTCCTGCTGTTACTGAGCTTGATCTTTTGGGCCGCGGGGGCAGCTCTGGCATACGTAAGCTCTTATGTGTTCACGAGTTACAAAACGTATGACCACTTCCTGGAAGACAAGTACACCCTGATTCCTGCGATCGTCATCCTGGCTGTTGCCGTGGTGATGTTTATCATTGGGACCATCGGATGCTGTGCCACTCTCCGCGAGTCACGGATTGGATTGGGATTTTTCCTGTTCATCATCCTGTTGCTCTTTGTAGCTGAAGTGGCAGCCTTTGTGCTGGGATTCATCTACAGGGCACGAgTGAGCACTGATGTCAAACGGTCAATGAGTGACGTGTTCAATAAGTATGATGGACACAATGCCGAAACAGGAGCAGTGGATTATTTGCAAAAACAGCTGCAGTGCTGTGGAGTGAAAAGCTACAATGACTGGAACACCACATCATGGTTCAACTCCACTGGCAATTCCACCGTGCCCCTCTCCTGCTGCAAGGTCAATAACAACAACTGCACTGGGAGAATTGACCAGCCCAGCCTCCTGTACACTCAGGGCTGCGAAGAGAAACTGGAACATGTCCTTCAAGAAGTCCTAAGCTATGCCATGCTGGTCATTCTGGGATTTGCCATCATCAAgTTCTTTGGCatgctgagtgtgtgtgtaattacgTGCAAGAAGAGGAACCAGAATGAATATCAGCCCCTGTCTGGGACATTTGCATAAATGTTCCTGGAAGCTTGGATGCTGGATTAGGAAACGAACTCTCTTACTGAGGAACCCCCGCATACATTTGGTTCTTTACTGAAGAAATTGACAGTGTTACCTCACCTGTGGTTTATTGTGTTCTACTCgatttctatttgtattatctgtgttgttgttgttattgtggtAGTTTTTTTGCTTAagatcaatcaaaacaaaaaggcaaaatatCACAGTTTTTGTAATTCTGTGAAATTGAACTCTTTTTGCTTAGTGTTTGTTGAAATGTGATAGTTCTGTCATTTCCCGTACAATACGTTTTACAAGATGTGAAGCAGGTCACCTCTTtgtggtggtggagggggaTTTTGAATTATGGAATGATGACTAAACTGGCTCGCCAAATTACCTACTGTAAATATGCACAAATGCTTATCATCTAAACTTCATGTTGTTTCAAGGCATTCtgaattaaagtattaaaaaggAATGCAGTTGATAGGAAATACATGAAACTGGTCTATTCAAAAGAATCTAATGACATTTGTTGGTATTCACAACATCCAGAAGGAATCGCTCATAGTTTGTGGTAGTAATGTAGTGTTGAATCACTGAAATTGTCAGAATTGCTAGAAAAGTCACTAATTTTGAAGAAGTGCCTTAATTCTGTtatcatttgtaaaatgtttaaatcaagttgtaataaaatcaaacattgtgGATGA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010068 True 1694 mRNA 0.43 7 12347990 12359546

Neighbor

gene id symbol gene type direction distance location
AMCG00010062 capsl coding upstream 207960 12137123 ~ 12140030 (+)
AMCG00010061 lmbrd2,LOC106568164 coding upstream 231475 12107561 ~ 12116515 (+)
AMCG00010063 NA coding upstream 253191 12085846 ~ 12094799 (+)
AMCG00010059 NA coding upstream 262927 12059775 ~ 12085063 (+)
AMCG00010057 NA coding upstream 440885 11871831 ~ 11907105 (+)
AMCG00010067 NA coding downstream 5613 12365159 ~ 12370529 (+)
AMCG00010071 NA coding downstream 19892 12379438 ~ 12416428 (+)
AMCG00010073 NA coding downstream 64600 12424146 ~ 12436820 (+)
AMCG00010074 NA coding downstream 78173 12437719 ~ 12440223 (+)
AMCG00010072 smad4a,LOC107668639,LOC107741365,LOC107559658 coding downstream 85548 12445094 ~ 12458161 (+)
G77673 NA non-coding upstream 133469 12209013 ~ 12214521 (+)
G77670 NA non-coding upstream 170501 12177228 ~ 12177489 (+)
G77669 NA non-coding upstream 176669 12170098 ~ 12171321 (+)
G77661 NA non-coding upstream 195669 12148931 ~ 12152321 (+)
G77621 NA non-coding upstream 322838 12024821 ~ 12025152 (+)
G77796 NA non-coding downstream 1040362 13399908 ~ 13400196 (+)
G77958 NA non-coding downstream 2600726 14960272 ~ 14961505 (+)
G77954 NA non-coding downstream 2644488 15004034 ~ 15047855 (+)
G78007 NA non-coding downstream 2845128 15204674 ~ 15221655 (+)
G78012 NA non-coding downstream 2869347 15228893 ~ 15232199 (+)
G77541 NA other upstream 646909 11700706 ~ 11701081 (+)
AMCG00010041 NA other upstream 958745 11289903 ~ 11389245 (+)
G77423 NA other upstream 1192521 11149626 ~ 11155469 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other upstream 2034504 10302926 ~ 10313486 (+)
AMCG00009959 NA other upstream 5285256 7042597 ~ 7062734 (+)
AMCG00010101 NA other downstream 2632373 14991919 ~ 15032181 (+)
AMCG00010116 LOC104924827,LOC102229495,LOC106923526,LOC105930787,LOC102305543 other downstream 3164900 15524446 ~ 15534087 (+)
AMCG00010119 NA other downstream 3268799 15628345 ~ 15642841 (+)
G78198 NA other downstream 3697985 16057531 ~ 16060087 (+)
AMCG00010144 adamts3,LOC103134868 other downstream 4106018 16465564 ~ 16547620 (+)

Expression


Co-expression Network