AMCG00010160


Basic Information

Item Value
gene id AMCG00010160
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17245585 ~ 17247150 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010160
CTCTAATGAACAGTATAAATTGCCGCCTTCTGCACTGTCTGAAAACATAATCTGCTGAGTGATCAAGACTCCTGAAGCTCAGACAATACTCGACAAAAGCAACACAATGAAGACAGCTGCTGTGGTCGTTCTTGCCGTTCTCCTGGTTGCTGATATCGAAGgAATGCCATCCATGAATAAGCTTCGATGCCGCTGTGCTGATGCAGGAGTTGATTTCATCCCACCAAGGCAAATCGAGAAGTTGGAAATGTTTCCCACCACCTCCACATGCGAGCGAGTGGAGATAGTCATCACTCTGAAAGACAATGCAGGGAAGAAGTGCTTGAATCCAACATCAAACTTTGCAAAGAATTTCGTCAAGAGAGCATTAAAATTACAGAAGGCGTGAAACAACATGAAGTAACAGCCCCATTAACTTCTACAATTCATCGCAGATTGCAAAACCCATTTCTACAGTAAAAGTTAAGAAAACTGAATGTGTGTGAATATGTTGTATTCGTAAATAgctaatatgtaaattattcattttttatgaacCATAAATTATTTCTTACACAAAGCTATGCCCATTGACAATATACATGAATGTGATCCGTCTGAACACTGAACATAATGTGCACATTTGGAGAAAAAGCTTACTGTACTAAAGAGAACATGCACTTAAAAGGTaaataactgtatatatatattttgacctAATACTGTGTCCAAggattttcttctcttttgaaaatcatgctcatattgtatttttgtattatctctttctgttatttatttttattttttgaatttttttcctgtaaatgGTGTTACTAATACTTATCAATAAAAATTGTTTTACGTTAACCAATAgattttctgtctctttgttATGATGGGATTGTTTGTACTAAAGTGGC
>TU97792
TGCTGAGTGATCAAGACTCCTGAAGCTCAGACAATACTCGACAAAAGCAACACAATGAAGACAGCTGCTGTGGTCGTTCTTGCCGTTCTCCTGGTTGCTGATATCGAAGgAATGCCATCCATGAATAAGCTTCGATGCCGCTGTGCTGATGCAGGAGTTGATTTCATCCCACCAAGGCAAATCGAGAAGTTGGAAATGTTTCCCACCACCTCCACATGCGAGCGAGTGGAGATAGTCATCACTCTGAAAGACAATGCAGGGAAGAAGTGCTTGAATCCAACATCAAACTTTGCAAAGAATTTCGTCAAGAGAGCATTAAAATTACAGGCGTGAAACAACATGAAGTAACAGCCCCATTAACTTCTACAATTCATCGCAGATTGCAAAACCCATTTCTACAGTAAAAGTTAAGAAAACTGAATGTGTGTGAATATGTTGTATTCGTAAATAgctaatatgtaaattattcattttttatgaacCATAAATTATTTCTTACACAAAGCTATGCCCATTGACAATATACATGAATGTGATCCGTCTGAACACTGAACATAATGTGCACATTTGGAGAAAAAGCTTACTGTACTAAAGAGAACATGCACTTAAAAGGTaaataactgtatatatatattttgacctAATACTGTGTCCAAggattttcttctcttttgaaaatcatgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010160 True 902 mRNA 0.36 4 17245585 17247150
TU97792 False 685 TUCP 0.38 4 17245637 17246988

Neighbor

gene id symbol gene type direction distance location
AMCG00010163 NA coding upstream 52235 17187429 ~ 17193350 (+)
AMCG00010153 NA coding upstream 470870 16769582 ~ 16774715 (+)
AMCG00010154 NA coding upstream 483827 16757802 ~ 16761758 (+)
AMCG00010151 NA coding upstream 513306 16722444 ~ 16732279 (+)
AMCG00010145 NA coding upstream 791129 16420684 ~ 16454456 (+)
AMCG00010168 NA coding downstream 4097 17251247 ~ 17261003 (+)
AMCG00010162 NA coding downstream 46917 17294067 ~ 17303416 (+)
AMCG00010161 NA coding downstream 57830 17304980 ~ 17311881 (+)
AMCG00010167 NA coding downstream 68395 17315545 ~ 17317008 (+)
AMCG00010166 NA coding downstream 70023 17317173 ~ 17334410 (+)
G78385 NA non-coding upstream 4100 17239050 ~ 17241485 (+)
G78381 NA non-coding upstream 16740 17226891 ~ 17228845 (+)
G78334 NA non-coding upstream 182673 17054873 ~ 17062912 (+)
G78316 NA non-coding upstream 352985 16892229 ~ 16892600 (+)
G78303 NA non-coding upstream 555713 16688785 ~ 16689872 (+)
G78392 NA non-coding downstream 8072 17255222 ~ 17255429 (+)
G78529 NA non-coding downstream 273117 17520267 ~ 17520854 (+)
G78546 NA non-coding downstream 547290 17794440 ~ 17845546 (+)
G78607 NA non-coding downstream 729024 17976174 ~ 17977305 (+)
G78635 NA non-coding downstream 811569 18058719 ~ 18077267 (+)
AMCG00010164 NA other upstream 20245 17220036 ~ 17225340 (+)
AMCG00010144 adamts3,LOC103134868 other upstream 697965 16465564 ~ 16547620 (+)
G78198 NA other upstream 1185498 16057531 ~ 16060087 (+)
AMCG00010119 NA other upstream 1602744 15628345 ~ 15642841 (+)
AMCG00010116 LOC104924827,LOC102229495,LOC106923526,LOC105930787,LOC102305543 other upstream 1711498 15524446 ~ 15534087 (+)
G78396 NA other downstream 27237 17274387 ~ 17277998 (+)
G78410 NA other downstream 97269 17344419 ~ 17353488 (+)
G78743 NA other downstream 1672761 18919911 ~ 18921444 (+)
G78794 LOC107575789 other downstream 1840179 19087329 ~ 19087754 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other downstream 1890853 19138003 ~ 19184069 (+)

Expression


Co-expression Network