AMCG00010176


Basic Information

Item Value
gene id AMCG00010176
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17455468 ~ 17465089 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010176
TTTGTAAGAGCAGGATGGACCAATACATCTGACTAAAGTCTATCTGGTATTGCACACACATTTGAGTTCTGCTGAAGAGTCTCGAGTCCCAACTCCAAATGTGGAAGAAGATCCTACTTTGTGGGTTAGTGGGGGCTGCTGTTCTTACGGTGGGGCTCCTGATCGGGCACTATGGTATCACGAAGAGCTCATCTCCAGATTGGGTGGGTGCTGTGTCTCGGGATGTGGACGAGAGTATGATTGAGCAGTTCATCAAACAGGTGGATAACAAACAAATTGAGGAGAATCTGAGAGAGTTGACCAAAGTGCCACATATGGCCACGAGCCAGGGAGATGTGCAACTGGTCCAGTACATGCTGGACCGATGGAAGGACCCAAAGACAGGTCTTGACGATGCCTGGAAAGATACATATAAAGTGTACCTGTCATTCCCCGATGACAACACTCCAAACAATGTCACTGTAGTTTCTTCTACCAACTCCGTGCTGTTCACCTCAAGACTCAAAGAGAAAGATTACACTGAGGACCAGAGACACCCGGACATTGTCCAGCCCTATGCTGCCTACGCCCCTGCTGGAAACCCAAGGggAAAGCTTGTGTATGCCAACCAGGGCACGGTCAGTGATTATGAGTTCCTGAACGAAACGCTGAACCTGACTGGTACCATTGCTATTGTGAGATATGGAGGAGCAGGCAGAGGTAACAAGGCAATAAACGGCGCCCCCTTTGGAGTGATTGGAGTGCTGGTGTACACCGATCCGAAGGACATTAATGATGGGAAGATGTCAGATGAGAACGAGACCTACCCCTACTCCTGGTACCTACCCCCATCTGGGGTGGAGCGAGGGGGTTTCGCTCAGGATTTTGGAGATCTGAGGACTCCATACCTGGCCGCTAAAGATCATACATACAGGATACCAGAAAGCGATATTAAAGGGCTCCCACCTATTCCCATGCAGCCTATTGGGTTTGAAGATGCATATACTTTGATCTGTGCACTGACTGGACCAGATCCACCACCAGATTGGAAAGGATCTTTCAACTGCAGCTACAAACTGGGCCCTGGATTTGATCTCAACTCTAAATTTCCCGACAGCGACGTACAAATGAACATTTACAACAAGTGTGTACTCAAGAACTCTGACAACGTGATGGGAGTGATTCGAGGCAGCGTGGAGCCAGACCGCTACATTCTCTATGGCAATCACAGAGACAGCTGGGTCCACGGGGCCATAGACCCCAGCAGCGGGACGGCCGTGATGCTGGAGATCACCAGGGTCCTGGGGAAGATGGTGAAAGAAGGGAAGTGGAGGCCACGCAGGTCCATTATTTTCGGAAGCTGGGGGGCAGAGGAGTTTGGTCTGATCGGCTCCACCGAATACGCAGAGGAATATTACAGCAAACTGAGGGATCGCACAGTCGCCTACATAAATGTTGATATATCAGTATTTGCCAATGCTACCCTGAGAGTCCAGGGCTCTCCTGCTGCCCAGAGTGTGGTGTTTACCGCTACCAAGCAGGTGAAGACTCCTGGATCTCAGACTCTATCCGTGTATGACAACTGGATTCAATATTTCAACCGCAGCAGCCCTACTCATGGGACAATCCCCCTtCTGGGCTATATGACTGGGGCTGGAAGTGACTATGCTGCTTTTATCCACTTCCTGGGCATCACTTCAATGGATATCGCATACACATATGACAGGAGCAAAACAAAGGCTCGCATCTACCCGGCTTATCACACGGCCTACGACACCTTTGACTACGCCGCCAGATACATAGACCCAGGGTTCACTAGTCACCAGACTGTGGCGCGAACGGCGGGCAACGTGCTGCTGCGCCTGGCCGACAGCCTGCTCATCCCCTTCAAAGCCAGCGACTATGCCGAGACCCTGGAGCAGTTCTCAAAGACTGCCTTGGATACTTACAATGTCATACTGACTGGGAAAAACATCGATATGGTGCCTTTAATGAATGCCATGGCAAAGTTCAAATCAGCCGCTTCTAACCTGGAAAAACTCATCAGGGACTCCGACCTGACCCTGGAGACGCCTCTGAAGGTGCGCAGGATCAATGACCAGCTCATGTTTATGGAGAGGGCATTTATCGATCCTCTGGCCTTCCCTGACAAACAGCACTTCAGGCATGTGATCTGGGCCTCCAAGTCATCCCGTGTGCCCACCTTCCCTGGGCTGGCCGACGCCTTTGACCAGGCCCAGAAGAGTGACTCCGCCCAAGACTGGCAGCAAGTCCACAGACACCTGTCCATAATCATCCAGGCCATAGAGGGCGCTGCACACGCCCTAGAAGAGGTGATTTAGAGAGAGCGTCATCATCCACACAGGGTCTTCCTGGTGCTGCTTGGCAGGCAAGTTTCAAAGGAAACCACTCCACACTACAATATTACTCCCTCACCAGAAAATGTCTCTTCTTGCACTTTTCACTTTTTGGGGgattttaataaagaaaggCAGTAAATACTATTGGTTTCctttgaaaacatgaattttGTCTTTCAAAATTAACCTGTTTGAACCTGAATAGCACACTTATTACAGTTGCTGAAGCTGAACACCTCCCAGTTGACTCCACCCCATCGGTCCTCAGGCAGTCTCGTTCCCTGTGAAACTCTGTGAATGGCACTTCCTGGAATGGCTGGAGTAGATCCCAGGCTTTAGGACTCATCCTGCTATCCCAGACTGTATGAGGGCTGCCCCACTGGCTCATTAAGACTGGGAAatacattagaacataagaacgtttacaaacgagaggaggccatgctacccatcgtgctcgtttggtgggCAATCTTAGAGACACAGAGTACCACACCGGGTTCCCCTTTAATGATCTGGCCTCACTCCCATTTATATGCACTCACCCTACCTGTATCATATTGAACACGGTCATAATCCTAACTGAAAAACACTTGGCTGCTGTACAATCCCCTCgaggaatacaaaatatactgaATATTAATTAGAATACAAAGAACaatccaaac

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008233 peptidase activity molecular_function

KEGG:

id description
K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010176 True 3007 mRNA 0.50 19 17455468 17465089

Neighbor

gene id symbol gene type direction distance location
AMCG00010177 gtf2h2c,LOC100196672,LOC103032811 coding upstream 15121 17434441 ~ 17440347 (+)
AMCG00010175 NA coding upstream 24339 17419613 ~ 17431129 (+)
AMCG00010173 NA coding upstream 37262 17409064 ~ 17418206 (+)
AMCG00010174 ak6,zgc:86811,LOC107592327 coding upstream 48563 17403555 ~ 17406905 (+)
AMCG00010165 NA coding upstream 78530 17363171 ~ 17376938 (+)
AMCG00010187 LOC107713368,LOC106565090 coding downstream 201647 17666736 ~ 17701501 (+)
AMCG00010186 NA coding downstream 248026 17713115 ~ 17724874 (+)
AMCG00010185 NA coding downstream 274045 17739134 ~ 17774687 (+)
AMCG00010184 rusc2,LOC107595920 coding downstream 335634 17800723 ~ 17821178 (+)
AMCG00010191 NA coding downstream 480143 17945232 ~ 17954544 (+)
G78392 NA non-coding upstream 200039 17255222 ~ 17255429 (+)
G78385 NA non-coding upstream 213983 17239050 ~ 17241485 (+)
G78381 NA non-coding upstream 226623 17226891 ~ 17228845 (+)
G78334 NA non-coding upstream 392556 17054873 ~ 17062912 (+)
G78316 NA non-coding upstream 562868 16892229 ~ 16892600 (+)
G78529 NA non-coding downstream 55178 17520267 ~ 17520854 (+)
G78546 NA non-coding downstream 329351 17794440 ~ 17845546 (+)
G78607 NA non-coding downstream 511085 17976174 ~ 17977305 (+)
G78635 NA non-coding downstream 593630 18058719 ~ 18077267 (+)
G78682 NA non-coding downstream 985401 18450490 ~ 18450809 (+)
G78410 NA other upstream 101980 17344419 ~ 17353488 (+)
G78396 NA other upstream 177470 17274387 ~ 17277998 (+)
AMCG00010160 NA other upstream 208318 17245585 ~ 17247150 (+)
AMCG00010164 NA other upstream 230128 17220036 ~ 17225340 (+)
AMCG00010144 adamts3,LOC103134868 other upstream 907848 16465564 ~ 16547620 (+)
G78743 NA other downstream 1454822 18919911 ~ 18921444 (+)
G78794 LOC107575789 other downstream 1622240 19087329 ~ 19087754 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other downstream 1672914 19138003 ~ 19184069 (+)
AMCG00010224 NA other downstream 2139529 19604618 ~ 19629439 (+)
G79382 NA other downstream 4581029 22046118 ~ 22047542 (+)

Expression


Co-expression Network