AMCG00010186


Basic Information

Item Value
gene id AMCG00010186
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17713115 ~ 17724874 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010186
CTGGACCCCGATGCCAGCGACATCCTGAATGAGCTGCAGGTGAAGCTGAACAACGTGCTCGATGAGCTGAGCACTGTCTTCGGGAACAGTTTCCAGCCCAAAATCGAGGAGTGCGTGAAGCAGATGGGTGACCTCCTTAGTCAGGTGAAGGGCACCGGCAACGTGCCAGCCAACGCCCGCAACACAGTGGCCGGTGATGCAGACAACGTGCTCCGGCCGCTCATGGACTTCCTGGATGGAAACCTGATGCTGTTTGCCACGGTGTGTGAGAAGACTGTCCTGAAAAGAGTGTTGAAGGACCTGTGGAGGATTGTCATGAACACCCTGGAGAAGGCCATCGTCCTGCCGCCGCTCACCGACACCTCGCAATATTTCCATGCTGGAGGCAACGGTCTGAAGAAGACCTTCCTGGAGAAGAGTCCCGAGCTGCAATCACTACGCTACGCTCTGTCGCTCTACACCCAGACCACAGACACCCTCATCAAGACCTTTGTGCAGACGCAGACCACCCAGGGTTCAGGAGTGGAGGACCCAGTGGGGGAGGTGTCCATACAGGTGGACCTGTTCACTCACCCAGGGACTGGTGAGCACAAGGTCACTGTGAAAGTGGTGGCGGCGAACGACCTGAAGTGGCAGACCTCCGCAATGTTCCGGCCCTTCGTGGAGGTGACCATGATCGGACCCCACCTGAGCGACAAGAAGCGCAAGTTCACTACCAAGTCCAAGAACAACAGCTGGGCGCCCAAATACAACGAGACCTTTCACTTTATCCTGGGGAACGAGGATGGGCCGCAGTGCTACGAgctgcaggtgtgtgtgaagGACTACTGCTTCGCGCGGGAGGACCGGGTGCTGGGCATCGCCGTCATGCAGCTGCGAGACATGGCTGACAAGGGCAGCTGTGCCTGCTGGTGCCCGCTGGGCCGGCGGGTGCACATGGACGAGACGGGGCTGACGGTGCTGCGCATCCTCTCCCAGCGCACCAACGACGAGGTGGCCCGGGAGTTCGTCAAGCTCAAGTCAGAGACGCGCTCCGCCGAGGAGGGG

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010186 True 1047 mRNA 0.60 7 17713115 17724874

Neighbor

gene id symbol gene type direction distance location
AMCG00010187 LOC107713368,LOC106565090 coding upstream 11614 17666736 ~ 17701501 (+)
AMCG00010176 NA coding upstream 248026 17455468 ~ 17465089 (+)
AMCG00010177 gtf2h2c,LOC100196672,LOC103032811 coding upstream 272768 17434441 ~ 17440347 (+)
AMCG00010175 NA coding upstream 281986 17419613 ~ 17431129 (+)
AMCG00010173 NA coding upstream 294909 17409064 ~ 17418206 (+)
AMCG00010185 NA coding downstream 14260 17739134 ~ 17774687 (+)
AMCG00010184 rusc2,LOC107595920 coding downstream 75849 17800723 ~ 17821178 (+)
AMCG00010191 NA coding downstream 220358 17945232 ~ 17954544 (+)
AMCG00010193 NA coding downstream 244336 17969210 ~ 17973694 (+)
AMCG00010194 NA coding downstream 265914 17990788 ~ 17995377 (+)
G78529 NA non-coding upstream 192261 17520267 ~ 17520854 (+)
G78392 NA non-coding upstream 457686 17255222 ~ 17255429 (+)
G78385 NA non-coding upstream 471630 17239050 ~ 17241485 (+)
G78381 NA non-coding upstream 484270 17226891 ~ 17228845 (+)
G78334 NA non-coding upstream 650203 17054873 ~ 17062912 (+)
G78546 NA non-coding downstream 69566 17794440 ~ 17845546 (+)
G78607 NA non-coding downstream 251300 17976174 ~ 17977305 (+)
G78635 NA non-coding downstream 333845 18058719 ~ 18077267 (+)
G78682 NA non-coding downstream 725616 18450490 ~ 18450809 (+)
G78758 NA non-coding downstream 1238649 18963523 ~ 18963725 (+)
G78410 NA other upstream 359627 17344419 ~ 17353488 (+)
G78396 NA other upstream 435117 17274387 ~ 17277998 (+)
AMCG00010160 NA other upstream 465965 17245585 ~ 17247150 (+)
AMCG00010164 NA other upstream 487775 17220036 ~ 17225340 (+)
AMCG00010144 adamts3,LOC103134868 other upstream 1165495 16465564 ~ 16547620 (+)
G78743 NA other downstream 1195037 18919911 ~ 18921444 (+)
G78794 LOC107575789 other downstream 1362455 19087329 ~ 19087754 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other downstream 1413129 19138003 ~ 19184069 (+)
AMCG00010224 NA other downstream 1879744 19604618 ~ 19629439 (+)
G79382 NA other downstream 4321244 22046118 ~ 22047542 (+)

Expression


Co-expression Network