Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010193 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 17969210 ~ 17973694 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0031290 | retinal ganglion cell axon guidance | biological_process |
| GO:0015672 | monovalent inorganic cation transport | biological_process |
| GO:0030001 | metal ion transport | biological_process |
| GO:0006811 | ion transport | biological_process |
| GO:0006812 | cation transport | biological_process |
| GO:0006814 | sodium ion transport | biological_process |
| id | description |
|---|---|
| ko04911 | Insulin secretion |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010193 | True | 531 | mRNA | 0.54 | 4 | 17969210 | 17973694 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010191 | NA | coding | upstream | 14666 | 17945232 ~ 17954544 (+) |
| AMCG00010184 | rusc2,LOC107595920 | coding | upstream | 148032 | 17800723 ~ 17821178 (+) |
| AMCG00010185 | NA | coding | upstream | 194523 | 17739134 ~ 17774687 (+) |
| AMCG00010186 | NA | coding | upstream | 244336 | 17713115 ~ 17724874 (+) |
| AMCG00010187 | LOC107713368,LOC106565090 | coding | upstream | 267709 | 17666736 ~ 17701501 (+) |
| AMCG00010194 | NA | coding | downstream | 17094 | 17990788 ~ 17995377 (+) |
| AMCG00010197 | NA | coding | downstream | 32525 | 18006219 ~ 18009050 (+) |
| AMCG00010192 | NA | coding | downstream | 47998 | 18021692 ~ 18034151 (+) |
| AMCG00010200 | NA | coding | downstream | 196976 | 18170670 ~ 18177842 (+) |
| AMCG00010199 | NA | coding | downstream | 214484 | 18188178 ~ 18202438 (+) |
| G78546 | NA | non-coding | upstream | 123664 | 17794440 ~ 17845546 (+) |
| G78529 | NA | non-coding | upstream | 448356 | 17520267 ~ 17520854 (+) |
| G78392 | NA | non-coding | upstream | 713781 | 17255222 ~ 17255429 (+) |
| G78385 | NA | non-coding | upstream | 727725 | 17239050 ~ 17241485 (+) |
| G78381 | NA | non-coding | upstream | 740365 | 17226891 ~ 17228845 (+) |
| G78607 | NA | non-coding | downstream | 2480 | 17976174 ~ 17977305 (+) |
| G78635 | NA | non-coding | downstream | 85025 | 18058719 ~ 18077267 (+) |
| G78682 | NA | non-coding | downstream | 476796 | 18450490 ~ 18450809 (+) |
| G78758 | NA | non-coding | downstream | 989829 | 18963523 ~ 18963725 (+) |
| G78760 | NA | non-coding | downstream | 997601 | 18971295 ~ 18971714 (+) |
| G78410 | NA | other | upstream | 615722 | 17344419 ~ 17353488 (+) |
| G78396 | NA | other | upstream | 691212 | 17274387 ~ 17277998 (+) |
| AMCG00010160 | NA | other | upstream | 722060 | 17245585 ~ 17247150 (+) |
| AMCG00010164 | NA | other | upstream | 743870 | 17220036 ~ 17225340 (+) |
| AMCG00010144 | adamts3,LOC103134868 | other | upstream | 1421590 | 16465564 ~ 16547620 (+) |
| G78743 | NA | other | downstream | 946217 | 18919911 ~ 18921444 (+) |
| G78794 | LOC107575789 | other | downstream | 1113635 | 19087329 ~ 19087754 (+) |
| AMCG00010216 | LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 | other | downstream | 1164309 | 19138003 ~ 19184069 (+) |
| AMCG00010224 | NA | other | downstream | 1630924 | 19604618 ~ 19629439 (+) |
| G79382 | NA | other | downstream | 4072424 | 22046118 ~ 22047542 (+) |
