AMCG00010194


Basic Information

Item Value
gene id AMCG00010194
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17990788 ~ 17995377 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010194
ATGATACCTGTTGTACTGGCTTCCATTCTCCTCGCCACCGCCTATGGGTGCGGTGTGCCTGCCATTGAGCCCTCTGTGACCAGGGTGGTGAATGGAGTTGATGCCCGTCCCCACAGCTGGCCCTGGCAGATCTCCCTTCAATACTTGAAAAATGATGAATGGAGACACACCTGCGGAGGCTCCCTGATTGCCACCAATTGGGTAATGACTGCTGCTCACTGTATCAACAAGGCATTCACCTACAGAGTTGTAGTTGGGAAGCACAATCTTCTGGCTGATGAACCTGGATCCAAGGCCATTGCGGCAGAGCAGCTCTTTGTCCACCAGAAATGGAATCCCATTTTTGTCGTCCTGGGCAATGACATTGCTCTGATTAAGTTGGCTGAGCACGTTACCCTCAGTGATCAGATCCAGCTGGCCTGTATTCCTCAGCCTGGAGACATCCTGACCAACAACTACCCCTGTTACATCACTGGCTGGGGCAGGCTCTACACTAATGGCCCCATTGCTGACAACCTGCAGCAGGCCCTTTTGCCCGTGGTCGACCACGCTACCTGCACGAAGCCCGACTGGTGGGGCCCTGCCCTGAGAACCAGCATGGTGTGTGCCGGAGGAGATGGCATCGTGGCTGGATGCAACGGTGACTCCGGTGGCCCCCTGAACTGCAGAAATGCTCAGGGCATCTGGGAGGTGCATGGCATCGCCAGCTTTGTCTCTGGTCTGGGCTGCAACTACGAGAAGAAGCCCACCGTCTTCACTCGCGTGTCTGCTTTCAACGACTGGATCTCCCAGaCCATGATGAGCTACTGA

Function

GO: NA

KEGG:

id description
K01311 CTRC; chymotrypsin C

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010194 True 810 mRNA 0.55 8 17990788 17995377

Neighbor

gene id symbol gene type direction distance location
AMCG00010193 NA coding upstream 17094 17969210 ~ 17973694 (+)
AMCG00010191 NA coding upstream 36244 17945232 ~ 17954544 (+)
AMCG00010184 rusc2,LOC107595920 coding upstream 169610 17800723 ~ 17821178 (+)
AMCG00010185 NA coding upstream 216101 17739134 ~ 17774687 (+)
AMCG00010186 NA coding upstream 265914 17713115 ~ 17724874 (+)
AMCG00010197 NA coding downstream 10842 18006219 ~ 18009050 (+)
AMCG00010192 NA coding downstream 26315 18021692 ~ 18034151 (+)
AMCG00010200 NA coding downstream 175293 18170670 ~ 18177842 (+)
AMCG00010199 NA coding downstream 192801 18188178 ~ 18202438 (+)
AMCG00010198 LOC107675632,LOC107736863,LOC107584535,LOC107661672,LOC107739687,LOC108437682 coding downstream 218638 18214015 ~ 18218373 (+)
G78607 NA non-coding upstream 13483 17976174 ~ 17977305 (+)
G78546 NA non-coding upstream 145242 17794440 ~ 17845546 (+)
G78529 NA non-coding upstream 469934 17520267 ~ 17520854 (+)
G78392 NA non-coding upstream 735359 17255222 ~ 17255429 (+)
G78385 NA non-coding upstream 749303 17239050 ~ 17241485 (+)
G78635 NA non-coding downstream 63342 18058719 ~ 18077267 (+)
G78682 NA non-coding downstream 455113 18450490 ~ 18450809 (+)
G78758 NA non-coding downstream 968146 18963523 ~ 18963725 (+)
G78760 NA non-coding downstream 975918 18971295 ~ 18971714 (+)
G78772 NA non-coding downstream 1010912 19006289 ~ 19010099 (+)
G78410 NA other upstream 637300 17344419 ~ 17353488 (+)
G78396 NA other upstream 712790 17274387 ~ 17277998 (+)
AMCG00010160 NA other upstream 743638 17245585 ~ 17247150 (+)
AMCG00010164 NA other upstream 765448 17220036 ~ 17225340 (+)
AMCG00010144 adamts3,LOC103134868 other upstream 1443168 16465564 ~ 16547620 (+)
G78743 NA other downstream 924534 18919911 ~ 18921444 (+)
G78794 LOC107575789 other downstream 1091952 19087329 ~ 19087754 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other downstream 1142626 19138003 ~ 19184069 (+)
AMCG00010224 NA other downstream 1609241 19604618 ~ 19629439 (+)
G79382 NA other downstream 4050741 22046118 ~ 22047542 (+)

Expression


Co-expression Network