AMCG00010213


Basic Information

Item Value
gene id AMCG00010213
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 19102868 ~ 19108097 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010213
GCAGTTGGATCATTCTGGTGCTGATATTATAGATTGTGTggcaaaattattatttgtattgggtTAATATTTATTgagtacattttcataaattgtcttttttaattttaatagaattttttaattccaggttcTATAATTACATCTGATGTTATGTATtcaattgattgattcattgttCTGTTTCTCTCAGCTGGAGCGGCAGATCCTTATGCAGAATCAGAtgcgagagagacagatggcAATGCAGATCGCCTGGACCAGGGAATTCCTCAAGTACTATGGAGCCTTTTTTGGATTGGCATCTTTTGCTCTAACTGCCGGTGCTTTGAGGAATAAGAATCCCAGGTTGTTCATACCTGTGATCCCACTCAGTTTCATCCTTGCCTACCAGCTGGACATGGGCTATGGAACCTTAATATACAGAATGAAGGGTAATCTATATGAAATTACATATACATGGGCACTGATCTCACCTGAAAGGCATGGTGGACAAAAGTTAAAATTTATCTAGGAAAATATTGCATAACGATCACTGGATTACAGTTATTACAGATTAACTGCTGACCAGTTGGAAAGGTCAGGGAACAGCAGTCTGGTTGGAGATGGGAGTTtaagggtttgtttttaaacatcgTTATATCAGCCTCTCTATTAGTGCACCGGTGAGAAAATTATTAAAACCaagctttatttttgttgttttcagtatttgatttgtattgtacTTGACAAACAGTGTTTTGGAACTGCTGCTCAATGGGTTGCAATTTTCAGGAAgaggaaaaatattttgtttaccatTGTTCTCCCTGTTACATAATATCATGCCTagttaaaatgcaattaagtgCCTATGTGTGGTTTTGGGATGTGGTTGGTACTTGATGTATTGTGTGCTTGTTTATAGCTACACATAGTACTAAGTCTAGGGTATGCAGTCCACTCATTTTAtctgtttgtgattttattttgttgatttaataaagtgtacagtttgttatattttaaattaaattacagaagTGGTTGCATTACATATAGACTGAGTGAACAGCTGTGTTGACCGGCAAAACTATTTGTCACAATTAATGTGAGTCATTGTTTAAGATAAG

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010213 True 1115 mRNA 0.36 2 19102868 19108097

Neighbor

gene id symbol gene type direction distance location
AMCG00010212 NA coding upstream 22152 19070927 ~ 19080716 (+)
AMCG00010202 nop56,LOC107661748,LOC107739720 coding upstream 221077 18874762 ~ 18881791 (+)
AMCG00010203 NA coding upstream 236377 18851157 ~ 18866491 (+)
AMCG00010204 celf4 coding upstream 297050 18776456 ~ 18805818 (+)
AMCG00010201 celf4,LOC103139612,LOC106958278 coding upstream 418228 18678221 ~ 18684640 (+)
AMCG00010214 NA coding downstream 8638 19116735 ~ 19119081 (+)
AMCG00010218 NA coding downstream 81785 19189882 ~ 19229691 (+)
AMCG00010217 NA coding downstream 121765 19229862 ~ 19245933 (+)
AMCG00010220 gak coding downstream 170247 19278344 ~ 19326725 (+)
AMCG00010221 acaa2,LOC107752996 coding downstream 230642 19338739 ~ 19360722 (+)
G78774 NA non-coding upstream 89110 19013402 ~ 19013758 (+)
G78772 NA non-coding upstream 92769 19006289 ~ 19010099 (+)
G78760 NA non-coding upstream 131154 18971295 ~ 18971714 (+)
G78758 NA non-coding upstream 139143 18963523 ~ 18963725 (+)
G78682 NA non-coding upstream 652059 18450490 ~ 18450809 (+)
G78939 NA non-coding downstream 382560 19490657 ~ 19494085 (+)
G79081 NA non-coding downstream 1174262 20282359 ~ 20282722 (+)
G79091 NA non-coding downstream 1359212 20467309 ~ 20467696 (+)
G79109 NA non-coding downstream 1523115 20631212 ~ 20631454 (+)
G79113 NA non-coding downstream 1549252 20657349 ~ 20657834 (+)
G78794 LOC107575789 other upstream 15114 19087329 ~ 19087754 (+)
G78743 NA other upstream 181424 18919911 ~ 18921444 (+)
G78410 NA other upstream 1749380 17344419 ~ 17353488 (+)
G78396 NA other upstream 1824870 17274387 ~ 17277998 (+)
AMCG00010160 NA other upstream 1855718 17245585 ~ 17247150 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other downstream 29906 19138003 ~ 19184069 (+)
AMCG00010224 NA other downstream 496521 19604618 ~ 19629439 (+)
G79382 NA other downstream 2938021 22046118 ~ 22047542 (+)
G79420 rpl17,LOC107579731 other downstream 3249872 22357969 ~ 22378809 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other downstream 3591645 22699742 ~ 22703409 (+)

Expression


Co-expression Network