AMCG00010250


Basic Information

Item Value
gene id AMCG00010250
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 21405183 ~ 21422900 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010250
TATAGACCTCCCGGAAAGCCAAATGTCCAATGCAGATCGCCAGAAAAAGAGACTTTTACTTGCTGGTGGGAGCCAGGTTCTGATGGAGGGCTGCCTACTAACTACTCACTGTTCTACAGAAAGGAAAACTCTGAAACAGTCAACGAGTGTCCAGATTACAAAACAGCTGGGAAAAACTCCTGTTTCTTTGACAAAAATCACACCACTATTTGGGTAACCTACAACATCACTGTCGTGGCAACCAATGCCTTAGGGAGCAATTTTTCTGACCCAAAAGATGTTGACGTGGTATACATCGTTCAGCCCCACAAACCTGAGAATTTGACAGTGGAACTGCAAAACAATGATCAGCCTTACCTTGTGGTGAATTGGGAACCCCCTCGCAAAGCTGACACAAGATCGGGCTGGATCACCCTCATCTACGAGCTGCGCATCAAGCGGGAGAAAGAAGACACATGGGAGaTGCACTTTGCTGGTCAGCAGAAGCAGTACAACCTGTTTAGTTTGCACCCAGGGGAGATTTACATGATTCAAGTTCGGTGTAAACCAGACCATGGATTCTGGAGTGAATGGAGTTCCACTTCCTACATTGAAATCCCTGACTATATTCAAAGAGACAGATCAATTGTGAAGCAGTGGCTGTTGCCACCAGTCCCAGGACCAAAGATTAAAGGATTTGACACACAGTTGCTTAAGtATGGGAAATCGGAAGACATGCTCAGTGCTTTGGTGAGCCAGGGCTTCCCTCCGACCTCAGACTGCGAGGATCTTCTAGTGGAATTCCTAGAGGTGGACGACAGTGATGAGAGGGAGCAAGTGATTAAAGTAAAAGATCTTCAGGAGAACAGAATTAAGTCAGCCAACAATTCACTGGATAATGACTCGGGTCGAGGGAGCTGCGACAGCCACACCCTGCTGCTAGAAAACAGCAATGAACCCAAAATGCCTGGCCTGGATAATGAGCATGTCATGAAAGAAGGCCACAGTGAGGCGACAAAGGATAGAAGTATCAGCCTATCTTGGAACAGCAACCCAGTGAGGCAACTAGACAACTTAGAAAATGCTGACAGGAACACCAAGACCTGGCCAACAAGCTTCTTGTCCCACCATCCTCAGAAACAGTCTTTCCACAGCATCCCTGAAATCCAGAAGCAAGGCTACATTTCAAGCAACCTCCAGTTTATGGCCAATCAGCCAGACCAAGCAGAAAACAACACCGATCCCCGCCCAATCAAAATCTCTACTGGCTATGGAAATCTACAGGGATACAGTGAGTTCTGTGTCAAGATCCCAGAAAACCAAATGACACAAGCATCTGCGTTCCCGCCTTCTAAATTCATGGAGTATGTTGAAGTCCAGAAAGTTAATCAGGAGAACATTctcattttgaaagcaaaaacTCAGGAAAGTCCTCAAGTCTTATCTCCAGAATTCACAGGGCAGGAGTATACCAAGGTGAGCGGTGTGGTAAATGACAATGTCCTTTTGTTGCAAAGGGATGCAGATGCGTCATGTTCCAGTGATCATCAGGAAAGAACAAACCCGGTGGAAAACCCTGGTCTTCAGCggaaattattaaacaatattcCTGTGCCACCCACACAAGACACAGTAATGCAGGTGGCACCAAATGGCTATGTGGATTCATCTGCATTGCCAACCTTCAAT

Function

GO: NA

KEGG:

id description
K05081 PRLR; prolactin receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010250 True 1668 mRNA 0.46 7 21405183 21422900

Neighbor

gene id symbol gene type direction distance location
AMCG00010252 NA coding upstream 300090 21081237 ~ 21105093 (+)
AMCG00010256 NA coding upstream 357706 21028778 ~ 21047477 (+)
AMCG00010251 NA coding upstream 382482 21004289 ~ 21022701 (+)
AMCG00010249 NA coding upstream 444627 20956381 ~ 20960556 (+)
AMCG00010245 NA coding upstream 464219 20931331 ~ 20940964 (+)
AMCG00010257 LOC103368378 coding downstream 106723 21529623 ~ 21530318 (+)
AMCG00010253 NA coding downstream 210505 21633405 ~ 21656223 (+)
AMCG00010255 rad1,LOC107718285,LOC107585563,LOC107743754 coding downstream 312271 21735171 ~ 21740568 (+)
AMCG00010254 brix1 coding downstream 317874 21740774 ~ 21746219 (+)
AMCG00010259 NA coding downstream 324141 21747041 ~ 21756358 (+)
G79190 NA non-coding upstream 331109 21073536 ~ 21074074 (+)
G79178 NA non-coding upstream 352607 21050816 ~ 21052576 (+)
G79157 NA non-coding upstream 405171 20988160 ~ 21000012 (+)
G79118 NA non-coding upstream 632102 20769999 ~ 20773081 (+)
G79113 NA non-coding upstream 747349 20657349 ~ 20657834 (+)
G79259 NA non-coding downstream 108777 21531677 ~ 21532597 (+)
G79272 cks2,LOC107675750,LOC107653382 non-coding downstream 206258 21629158 ~ 21632876 (+)
G79355 NA non-coding downstream 579443 22002343 ~ 22002665 (+)
G79357 NA non-coding downstream 584491 22007391 ~ 22010144 (+)
G79380 NA non-coding downstream 621733 22044633 ~ 22045794 (+)
AMCG00010224 NA other upstream 1775744 19604618 ~ 19629439 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other upstream 2221114 19138003 ~ 19184069 (+)
G78794 LOC107575789 other upstream 2317429 19087329 ~ 19087754 (+)
G78743 NA other upstream 2483739 18919911 ~ 18921444 (+)
G78410 NA other upstream 4051695 17344419 ~ 17353488 (+)
G79382 NA other downstream 623218 22046118 ~ 22047542 (+)
G79420 rpl17,LOC107579731 other downstream 935069 22357969 ~ 22378809 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other downstream 1276842 22699742 ~ 22703409 (+)
AMCG00010292 rchy1 other downstream 1893115 23316015 ~ 23329546 (+)
AMCG00010320 LOC104946060 other downstream 2497860 23920760 ~ 24009853 (+)

Expression


Co-expression Network