AMCG00010256


Basic Information

Item Value
gene id AMCG00010256
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 21028778 ~ 21047477 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010256
ATGTTATCTCTGAAGTGCTTTCCTGTCCTTTATCTTGTCGTATGCTGCAGTGCATTTGAAGGAAATATTTCAAGGAAATGTATGCAGGAcactaaaatgtttatttcagatcTAAATATGGAAAAACCAAGAGAATATGCTGTGCTGAAAACATTCCAGTATAAAAATAGGTCAATGGTACCCCCTATTCCATCTGTGTTCCTTCTGGACTCTTCACAAGATGTTTACATGACTGAGTGTTTTGCTAAAAGTGTATTCCCAGATGCATCTGCTATGATTTGTCTGCTTGTGTGCATTGTGTCAACTGCAATACCTCTTGGTGCAACCATATACACTGCTGTTCTCAAATGGAAACGTGGAAGAGAAATCCTACCTGGGACTGCCATcacttttaaatgcaattcaaaccatTATGGAACCCTCCCCTCAAAGGACATACCAAACAGCAGTAAAAATGGCAGTGCGGTTAAGGAGAACTGTAAACAGGAATGCAGTGATGCTGAAGAAGTCAACAGCAAAAAGAACTACTTGTATACTGTTTTGCAAGGCTTATCCCTGCAGAACTGGGTCTCAGGAGCCTTGTCAACAAGAAGCATGAAGGGGAGTTATTCTTCACTCAATGGGATCCGTGTCTTGAGTCTTCTCTGGATCATTTCTGGACATAATGTTCAGCTAAGTGCTTGGAACAACTTAGATAATTTTAAGCGATGGAAAGAGACAGTCGAGAGTAATCCCTTGTATGTCCTTGCATACAGTGGGCCTGTCTATTTAGCTGTAGACACTTTTCTGCTGCTTGGTGGTCTTTTGAGTGTAAAGTCTTTCTTCAGTTTAATTCAGAAAGCAGATGACACCATGAGTGTATCACTGGTTGCAAACTTTTGGTTCAAAAGGTTTAAAAGAATCCAGCCACTCCACCTTTACATAGTGTGCCTATGTATCGGGCTGCTCTCCATTATCTCCAAAGGCTCCTTCTGGTTCATCGTAGAGTTTGGGATAGACAACTGTAAAAAATACTGGTGGTCAAATGTATTGCttataaataacttattcaCAACTGCTGACATGtGTGCACCTTGGACTTGGTACCTTTCTGCTGATTTCCAGTTCTATATCACAACTCCTTTCCTTATTTTCCTCTACAGAAGGGCCTATATCAGCTACTTTCAGTATTATTATAACAAACCATACACAAGATATGGTTCATATTTGGTTGGGATTCTTCTAGGAATATTAATGAAGACTAAGAAAGGTGACATTTTGGAACATAAGTGGCAGGTTGTCCTCGGCTGGATTTCAACTTTCTCTGTCATGGCTTTATCGGTCGGCCTGGCATACGTTTTACAAGAGGTCCCTCAATACCCCTCAGCAGCTCATGCTGTTTACCAGGGCCTGCATCGCACTCTGTGGGCACTGGCTGTAGCTTGGATAATATTGGCTTGTGAGGAGGGATATGGAGTTTTACCTTTTCATGGCCAACCTCTCTCTGACAGTCATTTTGGGATACGCATTAACTGTGCTGATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010256 True 1524 mRNA 0.41 11 21028778 21047477

Neighbor

gene id symbol gene type direction distance location
AMCG00010251 NA coding upstream 6077 21004289 ~ 21022701 (+)
AMCG00010249 NA coding upstream 68222 20956381 ~ 20960556 (+)
AMCG00010245 NA coding upstream 87814 20931331 ~ 20940964 (+)
AMCG00010243 LOC106562978 coding upstream 104108 20898450 ~ 20924670 (+)
AMCG00010244 ccbe1,LOC107662219,LOC107719070,LOC107600894,LOC107701959,LOC107739739 coding upstream 154614 20847771 ~ 20874164 (+)
AMCG00010252 NA coding downstream 33760 21081237 ~ 21105093 (+)
AMCG00010250 NA coding downstream 357706 21405183 ~ 21422900 (+)
AMCG00010257 LOC103368378 coding downstream 482146 21529623 ~ 21530318 (+)
AMCG00010253 NA coding downstream 585928 21633405 ~ 21656223 (+)
AMCG00010255 rad1,LOC107718285,LOC107585563,LOC107743754 coding downstream 687694 21735171 ~ 21740568 (+)
G79157 NA non-coding upstream 28766 20988160 ~ 21000012 (+)
G79118 NA non-coding upstream 255697 20769999 ~ 20773081 (+)
G79113 NA non-coding upstream 370944 20657349 ~ 20657834 (+)
G79109 NA non-coding upstream 397324 20631212 ~ 20631454 (+)
G79091 NA non-coding upstream 561082 20467309 ~ 20467696 (+)
G79178 NA non-coding downstream 3339 21050816 ~ 21052576 (+)
G79190 NA non-coding downstream 26059 21073536 ~ 21074074 (+)
G79259 NA non-coding downstream 484200 21531677 ~ 21532597 (+)
G79272 cks2,LOC107675750,LOC107653382 non-coding downstream 581681 21629158 ~ 21632876 (+)
G79355 NA non-coding downstream 954866 22002343 ~ 22002665 (+)
AMCG00010224 NA other upstream 1399339 19604618 ~ 19629439 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other upstream 1844709 19138003 ~ 19184069 (+)
G78794 LOC107575789 other upstream 1941024 19087329 ~ 19087754 (+)
G78743 NA other upstream 2107334 18919911 ~ 18921444 (+)
G78410 NA other upstream 3675290 17344419 ~ 17353488 (+)
G79382 NA other downstream 998641 22046118 ~ 22047542 (+)
G79420 rpl17,LOC107579731 other downstream 1310492 22357969 ~ 22378809 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other downstream 1652265 22699742 ~ 22703409 (+)
AMCG00010292 rchy1 other downstream 2268538 23316015 ~ 23329546 (+)
AMCG00010320 LOC104946060 other downstream 2873283 23920760 ~ 24009853 (+)

Expression


Co-expression Network