AMCG00010261


Basic Information

Item Value
gene id AMCG00010261
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 21880507 ~ 21886138 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010261
GCAGTATTCAGTGACAGAACAAGCTACCAAAAGGATCTGCCAGAGAATTcctaaagaaaaaagaaacatgttcaCTTACAACATTTACCGGCTATTCTTTACCATTTCATTAGCCTATGGGTGTATAGGAGCTCTGGCCTCTGACTTGGATGAGGGAGATACTAAAGCTCCCTTGCCTGCTACTGTAGCTTATGATCACAGTGGAACAAGTAATGTGTCATCAGGAGACAGTCTCGAGTACACGAATGAAGATTATGAAGATAACGAAAATGAAGGGGATTTGTCCACATCAGAAGGCTCATTCTCGAGGGAGGCTGATATTATAAGAGTTCAACCAGTTGTCAAGCCCGAAGACAAGGGAAAACcaaagagaaagggaaaaggaaagCGAAAGAACAAGTCCAAGGGAGAAAAGAATGACAAGAGcacaagagaaaaagaaaggcaagagaaggagaaggataCGACACCAGACCCTTGCGCAACCACACACCTGGACTACTGTATCCATGGACACTGTAAATACATGGAGGAATTGAAGGAAGCTACCTGCATATGTTTAAAAGGATATGATGGCGAGAGATGTGGGATCCAGTTattgaaaactaaaaaagaagaagaaatgaagCCCACAGACATAACTCAGATGGTGCTGGTGATAATAGCAGTTGTCCTCTCCTTGATCAGCTTCACAGCCATTCTCTTGATTATATGTGCTCATTACAGAACTCACAAGAACTTCATTGCAAATTACCTCGGCACAAGCAGTGAAAAAGAGAAACTACGGCAAGACGGTGCACATATTGTCGTTTAAGCAGAAACAGGAACAAGAGCATTACTCTTGAAGTGGTTGAAGTGGGCCTGGTCTTGTTACTTTAAAGAAGAACTTGAACAAAGTTTTTACAAAATAGAGAGTTctatattttatagaaaaaaaactgaatgtatagaatttatatatttattaccgtatttaatatttaaaacttttacagttattttgtgtgtttgtatgtagtaagcattttaaaaataaatgaaaaaaactaaaaaggctgtttttcagtgttcaaacaaacttcaaacaaattatttattgatgtatttatttatttatttatttgtgtatttgtaatgtactgGTTATAACTTTAGTTGTCTTCCAGTTTTATTAAATAGATAACGGTGGATAAAGTTGTTtggttaaacaaataaaacattttattaatagatTTACAAGTATCTGTGCAGAACAGAAATTCGTAGCACCCCAAGGAACTTCTAAATGATTTTTGTAGAAACAAGTTCATTGTGTTTGAACCCTTCATGTCCTAGCCAACAATCAAGTTTTTTGTATGTACAAAATCTGCACTCAAATGTACTTCACTGCAATTGAAATTACAGCTATTACgtataattgttgttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010261 True 1430 mRNA 0.36 6 21880507 21886138

Neighbor

gene id symbol gene type direction distance location
AMCG00010258 NA coding upstream 39604 21831125 ~ 21840903 (+)
AMCG00010260 mthfd2l coding upstream 54168 21791529 ~ 21826339 (+)
AMCG00010259 NA coding upstream 124149 21747041 ~ 21756358 (+)
AMCG00010254 brix1 coding upstream 134288 21740774 ~ 21746219 (+)
AMCG00010255 rad1,LOC107718285,LOC107585563,LOC107743754 coding upstream 139939 21735171 ~ 21740568 (+)
AMCG00010266 myl5 coding downstream 131546 22017684 ~ 22020958 (+)
AMCG00010272 NA coding downstream 193150 22079288 ~ 22096930 (+)
AMCG00010278 tnksa,tnks,LOC107706493,LOC107567652,LOC107591704,LOC108279024,LOC107667582 coding downstream 643992 22530130 ~ 22541832 (+)
AMCG00010279 tnksa,LOC108436993,LOC108279024,LOC107706493,LOC107681059 coding downstream 764891 22651029 ~ 22694955 (+)
AMCG00010281 LOC108436681,LOC105014741,LOC106568256 coding downstream 1009782 22895920 ~ 22917724 (+)
G79272 cks2,LOC107675750,LOC107653382 non-coding upstream 247631 21629158 ~ 21632876 (+)
G79259 NA non-coding upstream 347910 21531677 ~ 21532597 (+)
G79190 NA non-coding upstream 806433 21073536 ~ 21074074 (+)
G79178 NA non-coding upstream 827931 21050816 ~ 21052576 (+)
G79157 NA non-coding upstream 880495 20988160 ~ 21000012 (+)
G79355 NA non-coding downstream 116205 22002343 ~ 22002665 (+)
G79357 NA non-coding downstream 121253 22007391 ~ 22010144 (+)
G79380 NA non-coding downstream 158495 22044633 ~ 22045794 (+)
G79394 NA non-coding downstream 183285 22069423 ~ 22071493 (+)
G79414 NA non-coding downstream 348877 22235015 ~ 22235264 (+)
AMCG00010224 NA other upstream 2251068 19604618 ~ 19629439 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other upstream 2696438 19138003 ~ 19184069 (+)
G78794 LOC107575789 other upstream 2792753 19087329 ~ 19087754 (+)
G78743 NA other upstream 2959063 18919911 ~ 18921444 (+)
G78410 NA other upstream 4527019 17344419 ~ 17353488 (+)
G79382 NA other downstream 159980 22046118 ~ 22047542 (+)
G79420 rpl17,LOC107579731 other downstream 471831 22357969 ~ 22378809 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other downstream 813604 22699742 ~ 22703409 (+)
AMCG00010292 rchy1 other downstream 1429877 23316015 ~ 23329546 (+)
AMCG00010320 LOC104946060 other downstream 2034622 23920760 ~ 24009853 (+)

Expression


Co-expression Network