AMCG00010283 (idua)


Basic Information

Item Value
gene id AMCG00010283
gene name idua
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 23005244 ~ 23044243 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010283
ATGTCACCCCAGATATACTCCTTAAATTTGTACTTCGGCAACCACCGAACCACAGGAAAGAAGCCAGTGAAGGTGTTTTTCAGCTTGGTCACCGAGCAGGAGAGACTTCTGCTCAGCTTGTTGGTCAGCACTTCCTTCGGGTCCCTCCGCCTGCGCACCTTCCTCTGCAGATGGAGGATGTTTCTCTGGTGCTCTCCCTCCATTGCCTCTGTATTATGTTCGGCCCAGCTCCTGAAAAgAGTTGTGAATGAAAAGCCACATTACAACTTCACCAACCTGGACAAACTTGTTGATCTCTTGTGGAAGAATGGGTTAAGGCCAGgttttgaGTTGATGGGGAGTGTGGCTGGTTATTTCACTGATTTTGAGGACAAGAGCCAAGTGATGGAGTGGAAAAACCTAATTACGCTCATTGCAAAAAGGTACATTGATAAGTATGGCTTAGGATACGTTTCTCAGTGGAACTTCGAAACTTGGAACGAACCCAACAACCACGATTTTGACAACGTTAACGTCACGATCCAAGGGTTCCTCAATTACTACGACGCCTGCTCTGAAGGACTAAAGGATGCAAGTCCTCTCCTGCGGTTTGGGGGACCGGGAGACTCCTGTCACTCCACACCCCACTCTCCCTACTGCTGGGCCATGCTGAGCCACTGCTACAATGGCACCAATATGTTCACTGGGGAGATGGGCGTCCGATTGGACTACATAGCGCTGCATAAAAAGGTTATCGCTCAGCACCAAAACCTGCTGATTGCCAGTCCTGCTAACACCATAAACTACACGCTGCTGAGCAACGATAATGCTTTCCTCAACTACCACCCCCATTACTTCACCCAGCGCACTCTCACTGCGCGCTTCCAGATGAACAACACACGCCCTCCTCACATGCAGCTGCTGAGGAAGCCTGTGCTGACGGTCATGGGCCTCCTGTCACTCCTGGGTGAGGAAGCCCATGGAGAGAAACAGATATCTGCTGATATAACTGTGGGTGGGACGTCTGAGGAACCAACATTAGGTGTTCTTGCCAGCACTCACCAACCTGCTGTCCCTAGCACTGCGGATAGCTGGCAGTCGTCAATACTGGTTTACAACAGTAACGACAACATGACCTCACTTGACTTAAGCTACGTGACTATCCATCTTAAAGGATATCCCACTCTGCAGGGGATGGTGTATGTAACATATTACCTAGACAACAATGCAACCAACCCTTATAAGCTGTGGAAAAGCTTCAGAAGTCCCGATTTCCCAACTGTTCATCAATTTCAGCAACTGAGGAATGTGGAGGATCCTTTGGTGACAGGACCCTACCCTTTCCCTTCTGAAGGCAGTTTAACTCTGAAAGCAGAGCTCCCTGTCCCTTCTGTGCTCCTGATCCATGTGTGTGCCCAACCGGGGGCTCCTCCAGATCAGGTCAGTGCATCTAACTCCTTTGGTCCTCCAGTAGAAAACTATCCAATACACCACTGTGCTGTGAAATGTGACAGatgtataaaaacCTATGAAGTTGAATTCTCAGAGGACAAGAAGACATTCCAAAGAGTAAATGAGAGGAACaccatttttacattatatgtaTATGCTCCAGaaaacacagatgtttcAGGTTTCTACAGAGTGCGTGCTGTGGACTACTGGAACAGACCTGAGGCTGTACACTCACCTGACTGCAGCACAGGCTCAAACTGGCCGGCCATGCAGATCTCCTCCTGCTTCTGGCGGACGATGCGCTGGATAGCGGGGGGTAGGCCACGAGGGTTACGGGAGAAGATCAGAGAGTACCCGTCCTCACAGGTGCCATCTTCCTTCAGAGAGCGGCAG

Function

symbol description
idua Predicted to enable L-iduronidase activity. Predicted to act upstream of or within carbohydrate metabolic process. Human ortholog(s) of this gene implicated in Scheie syndrome; mucopolysaccharidosis I; mucopolysaccharidosis Ih; and mucopolysaccharidosis Ih/s. Orthologous to human IDUA (alpha-L-iduronidase).

NR:

description
PREDICTED: alpha-L-iduronidase

GO: NA

KEGG:

id description
K01217 IDUA; L-iduronidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010283 True 1827 mRNA 0.50 13 23005244 23044243

Neighbor

gene id symbol gene type direction distance location
AMCG00010281 LOC108436681,LOC105014741,LOC106568256 coding upstream 87520 22895920 ~ 22917724 (+)
AMCG00010279 tnksa,LOC108436993,LOC108279024,LOC107706493,LOC107681059 coding upstream 310289 22651029 ~ 22694955 (+)
AMCG00010278 tnksa,tnks,LOC107706493,LOC107567652,LOC107591704,LOC108279024,LOC107667582 coding upstream 463412 22530130 ~ 22541832 (+)
AMCG00010272 NA coding upstream 908314 22079288 ~ 22096930 (+)
AMCG00010266 myl5 coding upstream 984286 22017684 ~ 22020958 (+)
AMCG00010282 pde6b,LOC108436964,LOC108232538,LOC107706500,LOC103473654 coding downstream 13377 23057620 ~ 23076233 (+)
AMCG00010290 NA coding downstream 65868 23110111 ~ 23138342 (+)
AMCG00010291 k0020,pum3,LOC107705054,LOC107742987 coding downstream 96239 23140482 ~ 23157907 (+)
AMCG00010293 NA coding downstream 265266 23309509 ~ 23313460 (+)
AMCG00010297 NA coding downstream 401874 23446117 ~ 23450175 (+)
G79476 dusp4,LOC107703586,LOC107708543,LOC107591703,LOC107589246 non-coding upstream 300136 22704789 ~ 22705108 (+)
G79443 NA non-coding upstream 529261 22475437 ~ 22475983 (+)
G79427 NA non-coding upstream 621112 22379763 ~ 22384132 (+)
G79415 NA non-coding upstream 755412 22249631 ~ 22249832 (+)
G79414 NA non-coding upstream 769980 22235015 ~ 22235264 (+)
G79508 NA non-coding downstream 43854 23088097 ~ 23088362 (+)
G79509 NA non-coding downstream 52348 23096591 ~ 23096838 (+)
G79567 vldlr,LOC106568141 non-coding downstream 141811 23186054 ~ 23188182 (+)
G79572 NA non-coding downstream 175294 23219537 ~ 23220917 (+)
G79596 NA non-coding downstream 289021 23333264 ~ 23333473 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other upstream 301835 22699742 ~ 22703409 (+)
G79420 rpl17,LOC107579731 other upstream 626435 22357969 ~ 22378809 (+)
G79382 NA other upstream 957702 22046118 ~ 22047542 (+)
AMCG00010224 NA other upstream 3375805 19604618 ~ 19629439 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other upstream 3821175 19138003 ~ 19184069 (+)
AMCG00010292 rchy1 other downstream 271772 23316015 ~ 23329546 (+)
AMCG00010320 LOC104946060 other downstream 876517 23920760 ~ 24009853 (+)
AMCG00010333 NA other downstream 1788828 24833071 ~ 24837552 (+)
AMCG00010366 tal2,LOC106585373,LOC106580046 other downstream 2948315 25992558 ~ 25996414 (+)
G80014 NA other downstream 2968241 26012484 ~ 26026303 (+)

Expression


Co-expression Network