AMCG00010321 (wdr7)


Basic Information

Item Value
gene id AMCG00010321
gene name wdr7
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 24081293 ~ 24123623 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010321
ATGGAgtgtaatgcattaaaaaaatgcacagGTAAAGCTCTCACCTTCCTGCTGCTGCAGCCACCCAGCCCCAAGCTACCCCCACACAGTACTATCCGACGCACTGCCATCGACCTCATCGGCCGCGGGTTCACCGTCTGGGAGCCATACATGGATGTGTCAGCTGTTCTGATGGGCTTGCTGGAGCTGTGCGCTGACGCTGAGAAACAGCTCGCCAACATCACAATGGGCTTGCCTCTTAGCCCTGCTGCTGACTCAGCCCGCTCGGCTCGACACGCTCTCTCGCTCATCGCCACGGCCAGACCACCAGCCTTCATAACAACCATCGCCAGGGAGGTCCACAGACACACTGCGCTTCAGGCCAACACCCAATCCCAGCAGAACGTTCACACCACTACCTTGGCCCGCGCCAAGGCAGAGATCCTCCGGGTTATCGAGATCCTCATTGAGAAGATGCCTACTGATGTCGTGGATCTACTCGTAGAGGTAATGGACATCATAATGTACTGCCTTGAAGGATCTTTAGTCAAGAAGAAAGGCCTTCAGGAATGTTTCCCTGCAATTTGTAGGTTCTACGTGGTGGGATACTGTGAGCGGAGTCACAGGATAGCAGTAGGGGCTCGCCATGGTTCAGTGGCACTCTACGACGTCCGCACTGGGAAATGTCAGACCATTCATGGACATAAAGGACCCATAACAGCAGTGTCTTTTGCTCCTGATGGGAGATACCTGGCCACGTATTCCAATGCAGACAGTCACATCTCCTTCTGGCAGATGAACACATCGTTGCTGGGCAGTATTGGCATGCTGAATTCAGCCCCTCAGTTGCGCTGCATTAAGACCTACCAGGTCCCGCCAGTGCAGCCTGCTTCCCCCGGCTCCCAGAATGCCCTGAAACTGGCCCGCCTCATCTGGACCTCCAACCGTAATGTCATCCTCATGGCGCATGATGGCAAGGAGCATCGCTTTATGGTCTGA

Function

symbol description
wdr7 Predicted to act upstream of or within hematopoietic progenitor cell differentiation. Predicted to be located in synaptic vesicle.

NR:

description
PREDICTED: WD repeat-containing protein 7 isoform X2

GO: NA

KEGG:

id description
K24738 WDR7; WD repeat-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010321 True 978 mRNA 0.55 8 24081293 24123623

Neighbor

gene id symbol gene type direction distance location
AMCG00010319 atp8b1 coding upstream 163687 23897773 ~ 23917606 (+)
AMCG00010314 NA coding upstream 220593 23857680 ~ 23860700 (+)
AMCG00010313 NA coding upstream 244825 23812550 ~ 23836468 (+)
AMCG00010315 shroom3 coding upstream 294939 23774521 ~ 23786354 (+)
AMCG00010310 NA coding upstream 349578 23724391 ~ 23731715 (+)
AMCG00010322 st8sia3,LOC106580045,LOC105014695,LOC106572171,LOC106585377 coding downstream 73853 24197476 ~ 24214335 (+)
AMCG00010323 onecut2,LOC106572165 coding downstream 104925 24228548 ~ 24229774 (+)
AMCG00010324 NA coding downstream 127377 24251000 ~ 24251582 (+)
AMCG00010325 txnl1 coding downstream 186738 24310361 ~ 24317700 (+)
AMCG00010328 NA coding downstream 490451 24614074 ~ 24625298 (+)
G79749 NA non-coding upstream 196486 23842459 ~ 23884807 (+)
G79752 NA non-coding upstream 227857 23851026 ~ 23853436 (+)
G79675 NA non-coding upstream 383045 23688730 ~ 23698248 (+)
G79673 NA non-coding upstream 405336 23639053 ~ 23675957 (+)
G79660 NA non-coding upstream 450689 23628625 ~ 23630604 (+)
G79820 fech non-coding downstream 147652 24271275 ~ 24275684 (+)
G79827 nars,LOC105905856 non-coding downstream 171765 24295388 ~ 24298215 (+)
G79829 nars non-coding downstream 176676 24300299 ~ 24301869 (+)
G79846 NA non-coding downstream 477509 24601132 ~ 24650632 (+)
G79849 NA non-coding downstream 600211 24723834 ~ 24727757 (+)
AMCG00010320 LOC104946060 other upstream 71440 23920760 ~ 24009853 (+)
AMCG00010292 rchy1 other upstream 751747 23316015 ~ 23329546 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other upstream 1377884 22699742 ~ 22703409 (+)
G79420 rpl17,LOC107579731 other upstream 1702484 22357969 ~ 22378809 (+)
G79382 NA other upstream 2033751 22046118 ~ 22047542 (+)
AMCG00010333 NA other downstream 709448 24833071 ~ 24837552 (+)
AMCG00010366 tal2,LOC106585373,LOC106580046 other downstream 1868935 25992558 ~ 25996414 (+)
G80014 NA other downstream 1888861 26012484 ~ 26026303 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other downstream 2256844 26380467 ~ 26403020 (+)
G80249 NA other downstream 3432792 27556415 ~ 27557007 (+)

Expression


Co-expression Network