Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010324 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 24251000 ~ 24251582 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010324 | True | 219 | mRNA | 0.56 | 2 | 24251000 | 24251582 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010323 | onecut2,LOC106572165 | coding | upstream | 21226 | 24228548 ~ 24229774 (+) |
| AMCG00010322 | st8sia3,LOC106580045,LOC105014695,LOC106572171,LOC106585377 | coding | upstream | 36665 | 24197476 ~ 24214335 (+) |
| AMCG00010321 | wdr7 | coding | upstream | 127377 | 24081293 ~ 24123623 (+) |
| AMCG00010319 | atp8b1 | coding | upstream | 333394 | 23897773 ~ 23917606 (+) |
| AMCG00010314 | NA | coding | upstream | 390300 | 23857680 ~ 23860700 (+) |
| AMCG00010325 | txnl1 | coding | downstream | 58779 | 24310361 ~ 24317700 (+) |
| AMCG00010328 | NA | coding | downstream | 362492 | 24614074 ~ 24625298 (+) |
| AMCG00010329 | NA | coding | downstream | 384575 | 24636157 ~ 24642653 (+) |
| AMCG00010330 | NA | coding | downstream | 421630 | 24673212 ~ 24704825 (+) |
| AMCG00010331 | NA | coding | downstream | 462065 | 24713647 ~ 24717375 (+) |
| G79749 | NA | non-coding | upstream | 366193 | 23842459 ~ 23884807 (+) |
| G79752 | NA | non-coding | upstream | 397564 | 23851026 ~ 23853436 (+) |
| G79675 | NA | non-coding | upstream | 552752 | 23688730 ~ 23698248 (+) |
| G79673 | NA | non-coding | upstream | 575043 | 23639053 ~ 23675957 (+) |
| G79660 | NA | non-coding | upstream | 620396 | 23628625 ~ 23630604 (+) |
| G79820 | fech | non-coding | downstream | 19693 | 24271275 ~ 24275684 (+) |
| G79827 | nars,LOC105905856 | non-coding | downstream | 43806 | 24295388 ~ 24298215 (+) |
| G79829 | nars | non-coding | downstream | 48717 | 24300299 ~ 24301869 (+) |
| G79846 | NA | non-coding | downstream | 349550 | 24601132 ~ 24650632 (+) |
| G79849 | NA | non-coding | downstream | 472252 | 24723834 ~ 24727757 (+) |
| AMCG00010320 | LOC104946060 | other | upstream | 241147 | 23920760 ~ 24009853 (+) |
| AMCG00010292 | rchy1 | other | upstream | 921454 | 23316015 ~ 23329546 (+) |
| G79475 | dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 | other | upstream | 1547591 | 22699742 ~ 22703409 (+) |
| G79420 | rpl17,LOC107579731 | other | upstream | 1872191 | 22357969 ~ 22378809 (+) |
| G79382 | NA | other | upstream | 2203458 | 22046118 ~ 22047542 (+) |
| AMCG00010333 | NA | other | downstream | 581489 | 24833071 ~ 24837552 (+) |
| AMCG00010366 | tal2,LOC106585373,LOC106580046 | other | downstream | 1740976 | 25992558 ~ 25996414 (+) |
| G80014 | NA | other | downstream | 1760902 | 26012484 ~ 26026303 (+) |
| AMCG00010369 | snx30,LOC107569385,LOC106591923 | other | downstream | 2128885 | 26380467 ~ 26403020 (+) |
| G80249 | NA | other | downstream | 3304833 | 27556415 ~ 27557007 (+) |
