AMCG00010332 (LOC106511892)


Basic Information

Item Value
gene id AMCG00010332
gene name LOC106511892
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 24804140 ~ 24818166 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010332
AAGAAAACAGGAAGTAAAGATCACAAGGATTTAAAAATCCAAAAACATTAGGGGACGGGTGAGGACACGATGGGGTCCGCAGTGGAGAGGACTGATGACTTGGTCAAGGAGTACTTGATCTACCGGGGATTCACAAACACCCTCAAACACTTAGATGCTGATATCAAAGCTGACAAGGAGAAAGGATTCCGAGTGGATAAAATCATCGAGCAGCTTCAGCTCTTCATCCAGAGCTATGACCTGCCGGCGCTCAAGGAGTACTGGACATACCTGGATCGCCGGCTCTTCAGTCGACTGGAGGATGTCTACCGGCCCACTGTGAACAAGCTGAGAACCAGCCTCTTCCGTTACTACCTTGTGTACACAGTACAGTCGAACCGCATTGAAAAAACCCAGGAGTTCTTTCAGAAGCAGGCGGTTGAGCTGCAGGGCCAAGCAGAGTGGCGGGACTGGTTCATCCTCCCTTTTGTCCCGGATCCCGGGCAGAACCATACCTTCTCCCCGTACTTCTCCCGCCAATGGGCCGACACTTTCCTGGTCTCTCTGCACAACTTCCTGAGTGTCCTCTTCCACTCTATGCATATCCTTTTGGGTACAGCCACTCTAGGACTAAGAATTACAGCTTCCTTGACCACCTCACCCCTGCCAGTGCTCCTGAGCTTTGACTCAGAGGTGCAGAGAAGTTCTGCCGCACAGGAGGAGAATGAGCTACTGCGCCATACGGTATTTGCATTACAGGCTGAGCAACCACGACTGAGGAAGGATGAGGAGATGGTGCATCACAAACTCCCGCCCTACGTACAGAACATGGACCGACTTGGAGACAGTGAGCTGGATTTGGTATCTAGCCAGCGCAATGTTAACCTAGCCAGCCAGCCTCGAGGGGGCTTCTTCCTCTCCACATTCCTCCCCCAAGGCAAGTGGGCACCTGCCAAGCCACCCCAAGGAGCTGGATCTTCGCCAACACAGGCCTCCATGGGGAGGAGAGACACTGCAGCCAATCAGTCTGTGAAGTCAAAGGACCCTCTGCCATCTAAGGATTCCAAGCCTGTTCCCAGTGGGGCAGGAACGAACGACCAGCCTTCCAGTCACTCCAGGCAACGACGACACCAGGACcatgaaaaggaaaggaaagcgCTGCTCTCCAAACCGCCAGTTCAGAGCACTGAGAGGAGTTTTGACACAGAGCCCCACCCTGAGGGAGCGGCTGACCGGACAGAATCACCAACCAATCAGATGCGAGGCACCGGACAGGGGGGTGGATCAGTGGAGCAGCCGTTCATTAAATTGAGCCAGGAGGAGTATGGCGAGCACCACTCTTGCATCATGCACTGCAGGGTGGATTGCTCAGGGCGCAGAGTGGCAAGTCTCGATATTGATGGAGTCATCAAGGTCTGGTCCTTTAACCCACTCATGCAGACCAAGGCCACAATCATGTCTAAGTCTCCTCTTCTGTCTCTCGAGTGGGCCACCAAGCCAGACAGACTGCTGCTGCTGGGAAGTGGTGTGGGAACCGTGCGGCTGATCCTGTCTCTGGCCTGTAGCCCCAGTGGGACGTCCTTTGTGTGCTCAGCAGCTGCCCACAGCCCTCGATCGGGGAGCCTGAATGAGAGTGGGGGTCGaatctctgtccctgtctcagGACAACTGCTGCTGTGGGACACCAAGACCGTGAAACAGCAGCTCCAGTTCTCTCTTGAACCTGGGCCCGTGGCGATAAACTGCACAGCCTTCAACCACAATGGCAACCTGTTGGTCACTGGGGCTGCTGATGGGATAATCCGACTCTTTGATATGCAGCGGTATGAGAGTGCAATGAGCTGGAAGGCCCACGAGGGAGAGGTGTATTCAGTGGAGTTCAGCTACGATGAAAACACCGTCTTCAGCATCGGGGAGGATGGCAAGTTCATTCAGTGGAACATCCACCGCAGTGGGGTGAAGCAGTCTGAGTATTCCCTGCCCCAGGACGCCACGGGCCCCTTTGTGCTCTCAGGGTACAGTGGGTACAAGCAGGTGCAAGTCCCAAGGGGGCGGTTGTTTGCCTTCGATTCAGAGGGGAACCACGTACTGACCTGTTCCAGCACCGGAGGACTCATCTACAGGCTGAACGATGGGGAGAGTGGCCTGGAGAGTGTGCTACCTCTGGGGGGCCACAAAGCGCCCGTGGTCACAGTGGACTGGTGCACTGCCATGGACTGTGGCACCTGCCTCACTGCCTCTATGGACGGCAAGATCAAACTGAGCACACTGCTGGCACAGAAATCCTACTAGAACCCCTGCTGGACACGTAACAAATGTGGGCCACAGCCAAGTAGATCTACTGTGTCTCATTGCCGTCTGACTGCGGCCATCTTTGATTACACTTCACATAAGTAATGACTAAAATGTCCTAAACATTCTTAGCTggtatgttttgcttttgctgcCTTgatgtttacttttgttttgtcagctGTAGCCTGACATTCGCTACATCTTGTTCTGTTAGTAAATTAGTTTACTAATATcatatgtaatgtttgtaaatgtacagcGCAAATGGGTACTTGTGCCACTAAAAAGCTTCCTCTAAaaca

Function

NR:

description
PREDICTED: WD repeat-containing protein 91-like

GO: NA

KEGG:

id description
K24760 WDR91; WD repeat-containing protein 91

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010332 True 2576 mRNA 0.53 16 24804140 24818166

Neighbor

gene id symbol gene type direction distance location
AMCG00010331 NA coding upstream 86765 24713647 ~ 24717375 (+)
AMCG00010330 NA coding upstream 99315 24673212 ~ 24704825 (+)
AMCG00010329 NA coding upstream 161487 24636157 ~ 24642653 (+)
AMCG00010328 NA coding upstream 178842 24614074 ~ 24625298 (+)
AMCG00010325 txnl1 coding upstream 486440 24310361 ~ 24317700 (+)
AMCG00010338 NA coding downstream 33621 24851787 ~ 24896459 (+)
AMCG00010344 trabd2a,LOC106513543 coding downstream 626906 25445072 ~ 25445484 (+)
AMCG00010345 rnf170,LOC104928258 coding downstream 762262 25580428 ~ 25590886 (+)
AMCG00010346 LOC108439146 coding downstream 963229 25781395 ~ 25782444 (+)
AMCG00010347 thap1 coding downstream 1011033 25829199 ~ 25833535 (+)
G79849 NA non-coding upstream 76383 24723834 ~ 24727757 (+)
G79846 NA non-coding upstream 153508 24601132 ~ 24650632 (+)
G79829 nars non-coding upstream 502271 24300299 ~ 24301869 (+)
G79827 nars,LOC105905856 non-coding upstream 505925 24295388 ~ 24298215 (+)
G79820 fech non-coding upstream 528456 24271275 ~ 24275684 (+)
G79924 NA non-coding downstream 180128 24998294 ~ 24998497 (+)
G79952 NA non-coding downstream 764152 25582318 ~ 25582575 (+)
G80032 NA non-coding downstream 1308917 26127083 ~ 26127308 (+)
G80138 NA non-coding downstream 1555486 26373652 ~ 26375356 (+)
G80140 NA non-coding downstream 1586440 26404606 ~ 26409613 (+)
AMCG00010320 LOC104946060 other upstream 794287 23920760 ~ 24009853 (+)
AMCG00010292 rchy1 other upstream 1474594 23316015 ~ 23329546 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other upstream 2100731 22699742 ~ 22703409 (+)
G79420 rpl17,LOC107579731 other upstream 2425331 22357969 ~ 22378809 (+)
G79382 NA other upstream 2756598 22046118 ~ 22047542 (+)
AMCG00010333 NA other downstream 14905 24833071 ~ 24837552 (+)
AMCG00010366 tal2,LOC106585373,LOC106580046 other downstream 1174392 25992558 ~ 25996414 (+)
G80014 NA other downstream 1194318 26012484 ~ 26026303 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other downstream 1562301 26380467 ~ 26403020 (+)
G80249 NA other downstream 2738249 27556415 ~ 27557007 (+)

Expression


Co-expression Network