AMCG00010353 (kiaa1958,LOC107558658,LOC107685162)


Basic Information

Item Value
gene id AMCG00010353
gene name kiaa1958,LOC107558658,LOC107685162
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 26341343 ~ 26349330 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010353
GAAGTGAGGCCCGACACCATGGAGGACTGCTTGCATACATCTTCTGAGAACCTATCCAAGCTGGTGAGCTGGGCCCATAGCCATGGAACCATATGTAACCTCATCCCCAATCTCAAGCACTTACTTTCGGAGGGTTCCCATGGCAACCTGACAGCCATGTGGGGTTGCAGCGCCGGCCATGCTTATCACTGGCCCTTGACCGCCACCTGCCTGGCCGGGTCTCAAGAGCGTATGTGCTACCAGGACAGCCGCAGCTTCAACTCGGACAGCCCCAGCATCCTGGGAGCGGCCTCAGAAACACAGCCCAGCCCTGGAGACAGGTTTGTGGGGAGAGTGTCCAAAGGCAAGACAGACTGTGACCACTCCTACTGCAGTGAGCCCTCAGAAGCAGATGACAACACTGAGGACTATGAAGGTGACAGTGCTCTGTTTGACATGGTGTGCGAATCCTCCGTCACGGACGAAGACAGCGACTTTGAGCCCCAGCCGCACAGGCCACACCCCACTCTTAGAAAGAGACTGAATCCTGGGCTGCTGCCGGGAAAGTTGACTCCTTCATGCCAGACTTTGGAGGACAGAGCTGGTGACATGATGGTGAAGAAAATCAAGCAGGAGATACCCGAGGACTATTACATTGTGGCCAATGCCCAACTCACTGGGGGCATTGATGGCCCGGCTTTGTCGATAACCCAGTCGCCAAAGCACAAGTCCCAAACTCAAACTCCTGGACCATCACCTTCACACACAGTGCCTGTAAAGCCAGCTGCCCTGGCCTCTACCTCCGTCACTGTGGATGTAAACGCAGTGGGggtgtctgtctctccccaaAGCAGCGGGAGCAGCAACGGCAACCCCCGGGCCCCAACTGCCAAGCCACTCTGTGCCACTGCCTCAGCTGGCCATGGCAGGTTAATGATAAATGTTCACCCACCCCGACAACCTGTTGCTGTCCAAATGCCTGCCAGCACTTCCAATGCCAACCAGCACATCAACATCCCCCTGTCTGCCCTCCAGCTCCCAGGCCAGGACGAGCACATGGAGCAACTCCCCGGCGACGACATGGTGAAGCCCTCTGCCAAACCAGTGACCGCGATTGAGGTGGATCTCTCTCCTGCTGCCATTAACCCGGAGCTGGAGGTTAGCTCCAGTCAGCAGCAAGGCAACATGTCTCAGGCCTTCAGCGCAGAATCCAAAATGGAAGCAGCAGAGCTAGATGAAAGGCAAGCCGAAGCTAACAGAGAACAGAATGAGAAGACAATCCGGAGCACTCAGACGGCACTCAGAAACTTCCGCGAGTTCCTCATATCCAAATACCCCTCAGAAACCCGCGAAATTTACACAATCCCCTGTAATGAGCTGGATGCCTACCTGGCTTCCTTCTTTGTTGACGCCAGACAAAAGGATGGCTCGGAATATGAACCCAACAGTCTGGCCAATTATCAGTGCGGCCTGGAGCGGTACCTCAAAGAACATCGCTACAGCTACAGCATCACCAGGGATAAAGAGTTCAAACGCTCCCAGGAGGCCCTTAAACAGAAGCAGCTTGAGCTCAAATTCAAAGGGAAGGGAAACAAGCCCCACAAGTCCATGAAGCTCACCTTCGCCGATGAGCTGATCCTAAGAAAGAGGGGTCTCCTTAGCCGATTCAACCCCGAGGGGCTGCTCAACCTAGTGTGGCTGAACAACACCAAGGCCTTCGGACACTGCACGGGCTTCCACGGATCCACACTGAAGTGGGGAGACATAAGACTGCGTTCCACAGAGACAGGCTTAGAGTGCCTGGAGTGGACCTACCAGGAGTCAACGGACACCAACAACAAGACGAAGAGGGCCGGGACTGAGTGCCGGATCTATGCCACGCCCCACGCGCCCCAAACCTGTCCTGTTCAAGACTACAAGGAATACGCCCAAAGGAGGCCCCCCGCCATGCGCTACGAGGACGCCCCTTTCTATCTGTCCATTAAGCCAGTGGTCAACCTGGCTGCTCTGCACTGGTACAACTGCCAAGCACTGGGCAAGAACAAGCTGGCCAAGATGGTGAAGACCATGTGCGAGAAGGGCAACATCCCAGGCAGGAAGACCAACTTCAGTGTCTACCAGAGCTGCAGCACTCTCTCCGAGGCGCAGAGCAATCAGCTGGTGCTCATCTGCAACAACCTCAGCCAGCAGGCCGCTCAGTCTATGAGCTCCCATGCCAGTGGTACTAACTTTGTGATCGCTGGCTCCTTTGACTCCTCCTCAGACACCACGTGA

Function

NR:

description
PREDICTED: uncharacterized protein KIAA1958 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010353 True 2253 mRNA 0.56 2 26341343 26349330

Neighbor

gene id symbol gene type direction distance location
AMCG00010357 hsdl2,LOC107558657,LOC101073112 coding upstream 12675 26306640 ~ 26328668 (+)
AMCG00010361 ugcg,LOC107571241,LOC107685163,LOC107558686 coding upstream 179412 26146725 ~ 26161931 (+)
AMCG00010354 NA coding upstream 260859 26069182 ~ 26080484 (+)
AMCG00010355 dnajc25,LOC107575448,LOC107682878 coding upstream 278450 26059148 ~ 26062893 (+)
AMCG00010362 ythdc1,LOC107693408 coding upstream 284238 26042341 ~ 26057105 (+)
AMCG00010368 NA coding downstream 13909 26363239 ~ 26365061 (+)
AMCG00010372 NA coding downstream 273019 26622349 ~ 26638228 (+)
AMCG00010377 NA coding downstream 385967 26735297 ~ 26735518 (+)
AMCG00010374 plppr1,LOC107653496,LOC107702599,LOC107710008,LOC107750956 coding downstream 398238 26747568 ~ 26751936 (+)
AMCG00010378 NA coding downstream 568567 26917897 ~ 26921875 (+)
G80032 NA non-coding upstream 214035 26127083 ~ 26127308 (+)
G79952 NA non-coding upstream 758768 25582318 ~ 25582575 (+)
G79924 NA non-coding upstream 1342846 24998294 ~ 24998497 (+)
G79849 NA non-coding upstream 1613586 24723834 ~ 24727757 (+)
G79846 NA non-coding upstream 1690711 24601132 ~ 24650632 (+)
G80138 NA non-coding downstream 24322 26373652 ~ 26375356 (+)
G80140 NA non-coding downstream 55276 26404606 ~ 26409613 (+)
G80163 NA non-coding downstream 148439 26497769 ~ 26502274 (+)
G80207 NA non-coding downstream 566404 26915734 ~ 26916135 (+)
G80208 NA non-coding downstream 567211 26916541 ~ 26916839 (+)
G80014 NA other upstream 315040 26012484 ~ 26026303 (+)
AMCG00010366 tal2,LOC106585373,LOC106580046 other upstream 344929 25992558 ~ 25996414 (+)
AMCG00010333 NA other upstream 1503791 24833071 ~ 24837552 (+)
AMCG00010320 LOC104946060 other upstream 2331490 23920760 ~ 24009853 (+)
AMCG00010292 rchy1 other upstream 3011797 23316015 ~ 23329546 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other downstream 31137 26380467 ~ 26403020 (+)
G80249 NA other downstream 1207085 27556415 ~ 27557007 (+)
AMCG00010393 isca1,LOC107662049 other downstream 1520109 27869439 ~ 27874931 (+)
G80326 NA other downstream 1557167 27906497 ~ 27906829 (+)
AMCG00010407 NA other downstream 1893659 28242989 ~ 28265443 (+)

Expression


Co-expression Network