AMCG00010381


Basic Information

Item Value
gene id AMCG00010381
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 27508855 ~ 27509833 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010381
TGCAAAGCTGGATTCTTCAGATCCTCTCCTCAGAGTTCAGGCTGCAATAAGTGTCCTCCACACAGCTACACCAATGTAGAGGCCTCTACATCCTGCGAGTGTGAGGACAGCTACTTCAAGAGGGACAGTGACCCGTCCAGTATGGCCTGCACAACTCCTCGAAATGCAATTTCCAATGTGAATGAGACAAGCGTGTTCCTGGAATGGATGGCCCCTGCAGAAACAGGAGGCCGGAAGGATGTGACCTACAATATTGTATGCAAGAAGTGCACCTCAGACTCTCAACTGTGTGAGGAATGTGGCAGCCATGTCCGGTATATCCCTCAGCAGATGAGCTTACGCAATACCTCAGTGATGGTGGCAGATCTTCTGGCACACACAAATTACACTTTCGAGGTGGAAGCCATCAATGGAGTGACAACTCTTGCCTCCCTACCAAGACAGTTTGTTTCTCTAAACGTGACAACCAACCAGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010381 True 477 mRNA 0.50 2 27508855 27509833

Neighbor

gene id symbol gene type direction distance location
AMCG00010382 epha5,LOC108428864,LOC107709147,LOC107702602 coding upstream 42233 27461042 ~ 27466622 (+)
AMCG00010380 NA coding upstream 231102 27264785 ~ 27277753 (+)
AMCG00010378 NA coding upstream 586980 26917897 ~ 26921875 (+)
AMCG00010374 plppr1,LOC107653496,LOC107702599,LOC107710008,LOC107750956 coding upstream 756919 26747568 ~ 26751936 (+)
AMCG00010377 NA coding upstream 773337 26735297 ~ 26735518 (+)
AMCG00010379 epha5,LOC108428864,LOC107567057,LOC107702602 coding downstream 15687 27525520 ~ 27548008 (+)
AMCG00010385 lpar1,LOC106568607,LOC107554848,LOC106572527 coding downstream 200780 27710613 ~ 27723371 (+)
AMCG00010383 NA coding downstream 253747 27763580 ~ 27775353 (+)
AMCG00010390 NA coding downstream 276604 27786437 ~ 27795327 (+)
AMCG00010384 NA coding downstream 300575 27810408 ~ 27813573 (+)
G80235 NA non-coding upstream 219999 27288579 ~ 27288856 (+)
G80217 NA non-coding upstream 305654 27203001 ~ 27203201 (+)
G80210 NA non-coding upstream 430351 27078289 ~ 27078504 (+)
G80208 NA non-coding upstream 592016 26916541 ~ 26916839 (+)
G80207 NA non-coding upstream 592720 26915734 ~ 26916135 (+)
G80264 NA non-coding downstream 285677 27795510 ~ 27796290 (+)
G80331 naa35 non-coding downstream 426333 27936166 ~ 27937054 (+)
G80362 NA non-coding downstream 511641 28021474 ~ 28021684 (+)
G80392 NA non-coding downstream 696488 28206321 ~ 28207268 (+)
G80468 NA non-coding downstream 1215174 28725007 ~ 28725281 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other upstream 1105835 26380467 ~ 26403020 (+)
G80014 NA other upstream 1482552 26012484 ~ 26026303 (+)
AMCG00010366 tal2,LOC106585373,LOC106580046 other upstream 1512441 25992558 ~ 25996414 (+)
AMCG00010333 NA other upstream 2671303 24833071 ~ 24837552 (+)
AMCG00010320 LOC104946060 other upstream 3499002 23920760 ~ 24009853 (+)
G80249 NA other downstream 46582 27556415 ~ 27557007 (+)
AMCG00010393 isca1,LOC107662049 other downstream 359606 27869439 ~ 27874931 (+)
G80326 NA other downstream 396664 27906497 ~ 27906829 (+)
AMCG00010407 NA other downstream 733156 28242989 ~ 28265443 (+)
AMCG00010431 NA other downstream 1984730 29494563 ~ 29503523 (+)

Expression


Co-expression Network