AMCG00010383


Basic Information

Item Value
gene id AMCG00010383
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 27763580 ~ 27775353 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010383
TTCAAAACACTGTGTAGTGCTCACTAATAATTAACATCTACCTGGGGCTTCCCAACAGCTGAAAAGTTACACTGTCTGAACGCCTGATCTTTGACATGGTTTTCCATTGGCCACAGAAGGAATGATGTGGTACTGACTAAATTGGATTTATGTGCCATTGAATTACAAAAGGTGGATTCATTGAGCATACATACAATGAATTCTGGAAAGCCATCATCTTTTGTTCGCATTGGAGAAAAGAGAGCCATTTCCAGGGCTGAGTTCTTGTCTTTGCTCAAAACCTACAATTGCTTTTTGACAGAGAAGACTAACCTGCAATTCACTTTTCACGAGGAGGGAAATAACATAGTTGTCGATGGACTCCTGATCATATCGTGGGGTGTTCAACGGCCTATTAGGTTGAAAATACAGGATGAGAAACAAGTGCTCTCCTTCATGAATCCCAGTTCACCAGACCCGACCAGTCCACTTGGAGGCAAGAGAGGGATGACACGATGGGGAGAATTTGATGATCTTCACCATATTGATGAGatggaagaaacaaaacaagagactCCCGCTGAAAACTCAAACCACAATTCAGGGCATAACCCTTATGAATGCAGCACACTGAAACTGCCTAGGGCACAGGCAGCTCTCGAAGAGGCATCTAACCTCTATCGCAGCATGAGCGACGCCTCGCTGGTGAAGAAGAGAGTGAAGTCCAAGGCAGCAGCAGAGAGGCAGCATGCCAGACACCACAGGTGCTCCATCAATGGCCATTTCTATAATTATAAAACTTCTATCTTTACTCCAGTATTTGGAACTTCAACAAATGTACGGATAAACAGCAAAATGACAACAGATGAAGTTATAACTCAGCTTCTTCACAAATTTAAGATAGAGAATGATCCAAATGAGTTTGCATTGTATTGCCTTCATCAAAGTGGAGAGCGAAGGAAACTAAACAACAGAGACTTTCCCTTGTGGGAAAGACTTCTTCTGGGACCTTCAGAAAAAAttgctaaaatgtttttaatggaacAAGATGAGCAGGAAGTAAGCACTGATGTGGCACAGTATCTTAACTTTGAACTGCCTATTCTGGAAGGATTTTTACATAAGTTAGAAGAGGAGGAGAACCGAGAGGTGCAGAAAATCATCACAAAGTACAGACAACGCAGACACGTGATTCAGCACATCCATTCCAAAAAAATGCCAAGGACAGAAACAACTgtttaacaagaaaacaaaatcaccaaGTGGAGGTTAGGATAAGCATTAGGCATAGTTATAGACCCTACCATGTTGTCCATTAGTGCACAATGAACTATTTTTGATACAACTATATCATATATTCATTGATTggagttttgttgttttttcagtaatatatattatatattttatttgagtaCTTTGTAAATCCATGTTATGGGTATTAAACCCTCTAATAGTTAACATAATGGTGAATgttgaatacaaaatgaaaataatattgaaattacaggatatacattttttttttaaacaacaacattggTTTGTTCGTTTGTCTTAAATAATGAAgcaactaatttaaatatttctaatgtacatataaaaaacaaatctcacattTCTACACATATAGGTCAATACATCTTTAGGCCGAAAGcttaagaatattttttaaatgatgcattTCCTTAATCTACCTCTGTTGTTGTCAGATATATTTAAGTAATAGTTTTACAAAATCTATTCAATGGTGTGCATCACAATCTCATGTACATGTAGAAAATCAGCAAACTTGAACTCAAGAGCATTTATCCATATGTAAACAAGTGCTCTCCATTAAACATTGTCAAATTGTAAACTTGCCagagtttatttttgaaaacaaaactaatcaaaaacaaaaccatgaaattaataacaaatgGAAAACTAAGGGCCAGTTAAATAAAAGAGCTTGCTCTGTGAATTGCTTGATATCTTTGAATGGATATCTGACTGCTAAACTTgtgtggtattaaatctaacatgATTTCTGCTGTCAAACCACCTTCTCACAGATCTTTTCTTGCACAAGCgagggaataaaacacagctttgacccacctgctgctagaaaactacacaactgtacatgtttagttagatgctacttttttatcatttttaatgtaactgccatgatgtacagttttgtagtttgctgGCTAAAGTTCTATTTAGTctcgcccaacaatacagttgGAATGGTCAATTTTGTTGCtgttaaatcaagaaaatacttttgagaaAGCAACCTGCAAATGCTCTTGCAGTACTCACCATGGACATATGGAGCTGTCTGGATAATATTTAGGGAATATTTTCACAGGCATATATGTTGGcctaacttgcaagccagtacacatCCAAGGGTACAGCGTTTGTGAAATGCACATTGGGTGGATACATATTTAAACCCCCAAAAAACTGTGTTAAaggcaaactacaaacttgcACAACATAGCaaatacatttaggattggaaggaacattttctttgaaaaagATGCCTTAGTTTTGGCACCCTGGGGGAGAATAGCTCTGCTGACATACTCTCTTTAGGGCACTGTGGAAAATCCATTATGTAGATTGGCATATGCTTTCCAAGGGAACAATAATGTTACATTGTTATATTACAAGGTGTACTGTAaatagtatttatgtatggatacgcaatttagacaatggaacaagtgtaaatatagctgtgtaacacaatcatatatttaaaatgtatgtttaaacatttaacactgGTTTGTATTACATCTTTTGCCACTGTGGCCACAGTACAAATATTCTTTGGAGAAAATATTACGAGTATGCAGGTGTGCTGTACCATGCAGGGCTGTCTACTTGCACTGCCCCTTATAGAACCGAGTAAAACGTTCGTACTTTCATTACCTCTTAGCAAACAGTAGATTACTAATATAGCAGAGATCTCATGACAAATTAAAATCGCATCGAGtgatattaaattatgtattttgtacaaATCTACACATCACCTTCAGTTTCAAATGCTGATAATTCGACACACGCAATAGAAAATGACACAATTCTTTGTTCCGAGtctcttctaatcataaatgtaaccactacggtgtaatgttttgtagtttgctattagccgGTGGGTCAAAATACGCTGCACATAAGTGGATGCACATATATAATCAAACACATCAGCATCGATCCACCTGCAAATAGGTAACATCTGGATATGGGCGTCTgccaggaagaaaataaataattacaatagcTCCACAGCTGTCATCAGTGCCggctttggtttttattttgccttctaCTTATTTGTAACCGCTACGAAGTACAGGCTTGTGGTTTTGTATCAGTGGGTAGATTAATGCTTTCGCTTTACACCTTcatctgtgtgtatatgcatgAGCCCTCGCTGCTTCTTGCAGACCATCTGCGGCTTTCAATCTCCAGTTTCCCTCCAATAACAACGAGCAGCTGCGCCGCAACACTCCCTCCTGCAACTCCTCCATTCGCATCTTCTaacatgtttgatttaattcatattttacagcACAGCATGTATCGTAAAGCCAACCTACATTAGTGAAGTATGGTTCATATAACATGAggtttatacactcacctaaaggattattaggaacaccatactaatactgtgtt

Function

GO: NA

KEGG:

id description
K09854 RASSF6; Ras association domain-containing protein 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010383 True 3681 mRNA 0.37 11 27763580 27775353

Neighbor

gene id symbol gene type direction distance location
AMCG00010385 lpar1,LOC106568607,LOC107554848,LOC106572527 coding upstream 40209 27710613 ~ 27723371 (+)
AMCG00010379 epha5,LOC108428864,LOC107567057,LOC107702602 coding upstream 215572 27525520 ~ 27548008 (+)
AMCG00010381 NA coding upstream 253747 27508855 ~ 27509833 (+)
AMCG00010382 epha5,LOC108428864,LOC107709147,LOC107702602 coding upstream 296958 27461042 ~ 27466622 (+)
AMCG00010380 NA coding upstream 485827 27264785 ~ 27277753 (+)
AMCG00010390 NA coding downstream 11084 27786437 ~ 27795327 (+)
AMCG00010384 NA coding downstream 35055 27810408 ~ 27813573 (+)
AMCG00010395 NA coding downstream 76209 27851562 ~ 27867176 (+)
AMCG00010396 NA coding downstream 117257 27892610 ~ 27898498 (+)
AMCG00010392 NA coding downstream 144225 27919578 ~ 27933573 (+)
G80235 NA non-coding upstream 474724 27288579 ~ 27288856 (+)
G80217 NA non-coding upstream 560379 27203001 ~ 27203201 (+)
G80210 NA non-coding upstream 685076 27078289 ~ 27078504 (+)
G80208 NA non-coding upstream 846741 26916541 ~ 26916839 (+)
G80207 NA non-coding upstream 847445 26915734 ~ 26916135 (+)
G80264 NA non-coding downstream 20157 27795510 ~ 27796290 (+)
G80331 naa35 non-coding downstream 160813 27936166 ~ 27937054 (+)
G80362 NA non-coding downstream 246121 28021474 ~ 28021684 (+)
G80392 NA non-coding downstream 430968 28206321 ~ 28207268 (+)
G80468 NA non-coding downstream 949654 28725007 ~ 28725281 (+)
G80249 NA other upstream 206573 27556415 ~ 27557007 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other upstream 1360560 26380467 ~ 26403020 (+)
G80014 NA other upstream 1737277 26012484 ~ 26026303 (+)
AMCG00010366 tal2,LOC106585373,LOC106580046 other upstream 1767166 25992558 ~ 25996414 (+)
AMCG00010333 NA other upstream 2926028 24833071 ~ 24837552 (+)
AMCG00010393 isca1,LOC107662049 other downstream 94086 27869439 ~ 27874931 (+)
G80326 NA other downstream 131144 27906497 ~ 27906829 (+)
AMCG00010407 NA other downstream 467636 28242989 ~ 28265443 (+)
AMCG00010431 NA other downstream 1719210 29494563 ~ 29503523 (+)
AMCG00010467 NA other downstream 2990984 30766337 ~ 30817603 (+)

Expression


Co-expression Network