Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010390 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 27786437 ~ 27795327 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0008233 | peptidase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010390 | True | 1265 | mRNA | 0.42 | 7 | 27786437 | 27795327 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010383 | NA | coding | upstream | 11084 | 27763580 ~ 27775353 (+) |
| AMCG00010385 | lpar1,LOC106568607,LOC107554848,LOC106572527 | coding | upstream | 63066 | 27710613 ~ 27723371 (+) |
| AMCG00010379 | epha5,LOC108428864,LOC107567057,LOC107702602 | coding | upstream | 238429 | 27525520 ~ 27548008 (+) |
| AMCG00010381 | NA | coding | upstream | 276604 | 27508855 ~ 27509833 (+) |
| AMCG00010382 | epha5,LOC108428864,LOC107709147,LOC107702602 | coding | upstream | 319815 | 27461042 ~ 27466622 (+) |
| AMCG00010384 | NA | coding | downstream | 15081 | 27810408 ~ 27813573 (+) |
| AMCG00010395 | NA | coding | downstream | 56235 | 27851562 ~ 27867176 (+) |
| AMCG00010396 | NA | coding | downstream | 97283 | 27892610 ~ 27898498 (+) |
| AMCG00010392 | NA | coding | downstream | 124251 | 27919578 ~ 27933573 (+) |
| AMCG00010394 | NA | coding | downstream | 163380 | 27958707 ~ 28013490 (+) |
| G80235 | NA | non-coding | upstream | 497581 | 27288579 ~ 27288856 (+) |
| G80217 | NA | non-coding | upstream | 583236 | 27203001 ~ 27203201 (+) |
| G80210 | NA | non-coding | upstream | 707933 | 27078289 ~ 27078504 (+) |
| G80208 | NA | non-coding | upstream | 869598 | 26916541 ~ 26916839 (+) |
| G80207 | NA | non-coding | upstream | 870302 | 26915734 ~ 26916135 (+) |
| G80264 | NA | non-coding | downstream | 183 | 27795510 ~ 27796290 (+) |
| G80331 | naa35 | non-coding | downstream | 140839 | 27936166 ~ 27937054 (+) |
| G80362 | NA | non-coding | downstream | 226147 | 28021474 ~ 28021684 (+) |
| G80392 | NA | non-coding | downstream | 410994 | 28206321 ~ 28207268 (+) |
| G80468 | NA | non-coding | downstream | 929680 | 28725007 ~ 28725281 (+) |
| G80249 | NA | other | upstream | 229430 | 27556415 ~ 27557007 (+) |
| AMCG00010369 | snx30,LOC107569385,LOC106591923 | other | upstream | 1383417 | 26380467 ~ 26403020 (+) |
| G80014 | NA | other | upstream | 1760134 | 26012484 ~ 26026303 (+) |
| AMCG00010366 | tal2,LOC106585373,LOC106580046 | other | upstream | 1790023 | 25992558 ~ 25996414 (+) |
| AMCG00010333 | NA | other | upstream | 2948885 | 24833071 ~ 24837552 (+) |
| AMCG00010393 | isca1,LOC107662049 | other | downstream | 74112 | 27869439 ~ 27874931 (+) |
| G80326 | NA | other | downstream | 111170 | 27906497 ~ 27906829 (+) |
| AMCG00010407 | NA | other | downstream | 447662 | 28242989 ~ 28265443 (+) |
| AMCG00010431 | NA | other | downstream | 1699236 | 29494563 ~ 29503523 (+) |
| AMCG00010467 | NA | other | downstream | 2971010 | 30766337 ~ 30817603 (+) |
