AMCG00010401


Basic Information

Item Value
gene id AMCG00010401
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 28210012 ~ 28212808 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010401
aaattaattgccAAATAAAACTTTCAGATGAAGGATGTGAATGCAGactaaaactgtattttataacatttatagATCAAATGGCATTTTCTAGATGTTATTTGTTGGTCTTTGTTCTCTAGTGTCAGAAAAATGGAAGCGCCTTTATCTCCAAGAGAATCTGGAAAGTTCATAGCAGAGAACAGCAAAGATGTCTTTATTGATGAAGAGGGGGTGAAAAGGGTAGCAGAGATGCTATATGAGAAAAGAGATAGTGAAGAATTCACAGCCAAAGGTTGGAAAAATATGAACCCACTGGCTCCTTCCTGGAATACTGATGATGCGATAAACTGGGTGTTTGTGGTGGACACTATGAACTTCTCCTTCTGGCCAGATAAAGAGGACCAACAGTGTACAGTGACATACAAGGATAAAACATACACTGGATACATGACACTTTGTGCTGCCATCACCAGAGCAATGGATGAAGgCATTCCTATCACACATGCATCctattttgcaaatatgactCTGGACGATCTGAAACACGTGCTGCGTTCCGACAATGACATTCCAATGCCAATGATCGAGGAACGGCACAGAGTACTCACTGAGGCAGGGAAAGTGCTGCTGCAATACGACGGGTCTTTCCTGAAGTTTATGAGTAGAGGCCACAACAGTGCTGAGAAAATGGTCAAGCTCATTGTCGACAGTTTGCCATCTTACAGAGATGAGGCCACTTTTCAGGGAAAGAAGGTTTCCTTTCATAAGAGAGCCCAGATCCTTGTTGCAGATTTCTGGGGCATCATGGAAGCCAGAGGAGAAGCCTGCATTCCTGATCTTAACTTCCTGACCATGTTTGCAGACTACCGGATTCCTCAGGCTCTGGTCTACCTGAAAGCACTCGGATACTCTGATGAGCTGATGAAGGCCCTCAAGGAAGGGGTGATATTGCCATCTGGAGACTGCAGGGAAGTAGAGATCCGGGGCTGTTCCATTTGGTGTGTGGAGAGGATCAAGATGGCCTTGTGGGATTTAACTGAGCAGAGAGAAGGACGCAGACTTGAAGATATAAATTCTGCCATTATTGATTTCTTCCTATGGCCCTATGCCAAAGAACACCATATGGAAATGGCTCACATTCCCATCCACCACACACGCTCCATTTACTATTGAGTGAGGCAAGTCTTCCCTCTGCCTTTATCACTGCaaaactgtaattacatttcacttattgctattaatttaatcaaaaaatCCCCAgtataaaaaagaagaaaacagccCAGTTAGAAAGAgatcaataataatcaaatacaaatgtgacatCTGTCAAAAGGCCACATAAAGATGAGTTGCTTTGTCTTGCATTCAATCATTTACCTAGCGCTGGCAGCTCACACTCATTCAGAAAGTCTGCTGTGTTTCAGTCTGATTTACACAAACGTTTGGTTTTGTGAGATGTTTCACTGCAGCCTTTATTCTAACTTCGACAACTCGAGATCTTTTCAATTGTGGAATAAAGGCTGGAGTACAAtccataattttaaataatgtattttatgctaaatgggaaaataaatatatgggaACAATAAACAAGTGTTT

Function

GO:

id name namespace
GO:0006260 DNA replication biological_process
GO:0008094 DNA-dependent ATPase activity molecular_function

KEGG:

id description
ko03030 DNA replication
ko03460 Fanconi anemia pathway
ko04110 Cell cycle
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010401 True 1587 mRNA 0.41 4 28210012 28212808

Neighbor

gene id symbol gene type direction distance location
AMCG00010404 hnrpkl,LOC107728199,LOC107691775,LOC107600582,LOC105890375 coding upstream 3831 28191582 ~ 28206181 (+)
AMCG00010402 NA coding upstream 41000 28156256 ~ 28169012 (+)
AMCG00010394 NA coding upstream 196522 27958707 ~ 28013490 (+)
AMCG00010392 NA coding upstream 276439 27919578 ~ 27933573 (+)
AMCG00010396 NA coding upstream 311514 27892610 ~ 27898498 (+)
AMCG00010403 NA coding downstream 3048 28215856 ~ 28232465 (+)
AMCG00010400 LOC107562640 coding downstream 20136 28232944 ~ 28242085 (+)
AMCG00010408 NA coding downstream 90484 28303292 ~ 28334876 (+)
AMCG00010409 NA coding downstream 127072 28339880 ~ 28371632 (+)
AMCG00010410 NA coding downstream 164034 28376842 ~ 28389169 (+)
G80392 NA non-coding upstream 2744 28206321 ~ 28207268 (+)
G80362 NA non-coding upstream 188328 28021474 ~ 28021684 (+)
G80331 naa35 non-coding upstream 272958 27936166 ~ 27937054 (+)
G80264 NA non-coding upstream 413722 27795510 ~ 27796290 (+)
G80235 NA non-coding upstream 921156 27288579 ~ 27288856 (+)
G80468 NA non-coding downstream 512199 28725007 ~ 28725281 (+)
G80469 NA non-coding downstream 558419 28771227 ~ 28775463 (+)
G80487 NA non-coding downstream 665016 28877824 ~ 28878359 (+)
G80489 NA non-coding downstream 687361 28900169 ~ 28994462 (+)
G80491 NA non-coding downstream 743464 28956272 ~ 29023473 (+)
G80326 NA other upstream 303183 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 335081 27869439 ~ 27874931 (+)
G80249 NA other upstream 653005 27556415 ~ 27557007 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other upstream 1806992 26380467 ~ 26403020 (+)
G80014 NA other upstream 2183709 26012484 ~ 26026303 (+)
AMCG00010407 NA other downstream 30181 28242989 ~ 28265443 (+)
AMCG00010431 NA other downstream 1281755 29494563 ~ 29503523 (+)
AMCG00010467 NA other downstream 2553529 30766337 ~ 30817603 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 4261225 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 5691007 33903815 ~ 33938237 (+)

Expression


Co-expression Network