AMCG00010423


Basic Information

Item Value
gene id AMCG00010423
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 29095337 ~ 29107346 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010423
GTACTGGGGAGAGCGGCAAAAGCACTTTCATTAAACAGATGAGGATCATCCATGGAGCTGGATACACAGATGAGGACAAGAAGGACTACACCAAGCTGGTGTATCAGAACATATTCACTGCCATGCAGTCCATGGTCAGAGCCATGGAAACACTGCAGATACAGTACCAAGATCAACAGAACCAAGAAGATTCAAAAATTATTGATGAAGTGGAAGTAGACAAGGTCACCacactggagaaaaaacaaatagaggTCATCAGGAAttatttgGGTGACTTGGATCGCATTGCAGATCCTGCATACTTGCCCACCCAGCAGGATATCCTTCGTAGGTCCGAAAGAAGGAAATGGATTCACTGTTTTGAGAATGTAACTTCCATCATCTTCTTAGTTGCACTCAGTGAATATGACCAGGTTCTAGCAGAGTGTGACAATGAGAATCGTATGGAAGAAAGCAAAGCCCTGTTTAAGACCATCATTACCTACCCCTGGTTTCAGCAGTCTTCGGTCATTCTGTTCTTAAATAAAACCGATATTCTGGATGAGAAGATCGTGTACTCTCATGTAGTGGATTATTTTCCTGATTTTACCGGTCCCAAACAAGATGCCGAATCTGCCAAAAggttcattttgaaaatgtaccaGGACCAAAATccagataaagaaaaaactgtCTATTCACATTTCACCTGTGCCACAGACACGGAGAACATTCGCTTTGTATTCGCGGCTGTGAAGGACACCATCCTGCAGCTGAATCTCAAAGAGTTCAACCTGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010423 True 782 mRNA 0.43 6 29095337 29107346

Neighbor

gene id symbol gene type direction distance location
AMCG00010424 gnaq,LOC106523804,LOC104920278,LOC103361005,LOC103398708,LOC103397278 coding upstream 35297 29048186 ~ 29060040 (+)
AMCG00010414 tle1 coding upstream 512412 28561146 ~ 28582925 (+)
AMCG00010411 rasef,LOC106580191 coding upstream 695946 28396667 ~ 28399391 (+)
AMCG00010410 NA coding upstream 706168 28376842 ~ 28389169 (+)
AMCG00010409 NA coding upstream 723705 28339880 ~ 28371632 (+)
AMCG00010421 NA coding downstream 115970 29223316 ~ 29228983 (+)
AMCG00010420 NA coding downstream 142106 29249452 ~ 29251205 (+)
AMCG00010422 NA coding downstream 165865 29273211 ~ 29283590 (+)
AMCG00010425 rfk coding downstream 207954 29315300 ~ 29317556 (+)
AMCG00010433 NA coding downstream 402296 29509642 ~ 29513418 (+)
G80490 NA non-coding upstream 30964 29061784 ~ 29064373 (+)
G80491 NA non-coding upstream 71864 28956272 ~ 29023473 (+)
G80489 NA non-coding upstream 100875 28900169 ~ 28994462 (+)
G80487 NA non-coding upstream 216978 28877824 ~ 28878359 (+)
G80469 NA non-coding upstream 319874 28771227 ~ 28775463 (+)
G80519 NA non-coding downstream 1851 29109197 ~ 29110019 (+)
G80521 NA non-coding downstream 8486 29115832 ~ 29118058 (+)
G80567 NA non-coding downstream 190812 29298158 ~ 29303550 (+)
G80580 pcsk5,LOC106580081,LOC107548272,LOC107723238 non-coding downstream 244808 29352154 ~ 29357030 (+)
G80595 NA non-coding downstream 335764 29443110 ~ 29457978 (+)
AMCG00010407 NA other upstream 829894 28242989 ~ 28265443 (+)
G80326 NA other upstream 1188508 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 1220406 27869439 ~ 27874931 (+)
G80249 NA other upstream 1538330 27556415 ~ 27557007 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other upstream 2692317 26380467 ~ 26403020 (+)
AMCG00010431 NA other downstream 387217 29494563 ~ 29503523 (+)
AMCG00010467 NA other downstream 1658991 30766337 ~ 30817603 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 3366687 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 4796469 33903815 ~ 33938237 (+)
G81496 NA other downstream 5594092 34701438 ~ 34707394 (+)

Expression


Co-expression Network