AMCG00010433


Basic Information

Item Value
gene id AMCG00010433
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 29509642 ~ 29513418 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010433
ggaagatgagaaagtcgaaacgcgtaagcatcATATTGTTCGCTAtttcttcaatatttaatacatgtttatatatatatatatatatatatatatatatatataattaacgaTTGTGGACTGTTCATAGACGGGAGATGCTGTCCATCTGATTCTTCAATTTGAGGATAATCCATTTTATATACACTCCCTTGGACAAGTCGGCCTCCATGTAGTTTATTcgctgctaacacacaatgttggcACAACGTTGAAGCAACGTAATTTACGTTACCACTTTATGTCAATctttaataaactgaaaaaaacacaccttgGCAGGTCTAAATGCTTTATCAGAAATCAAACATGTTGCTTATCTATTGATACGTGGTTGTTGTTGCAGAGCAAGGTTGATGACTTGCTAAAGTAAATCAGTAAACTTATTGCATAACTCAGCAGAAACTTATAAATTCAGATACAATTGTGGGGTAACACAACACCTGCCAAACAGATCAAGACGattcTCAAGATGGGGAAAGTCTACTTATGCATCGCAGTGGTTCTGGTCTGCTCTGCTGTCCTGGCTGATCACAATGGAGACCACACACATGAGCACCAAGGTGGTAAAGGCCACCAGCACCACCAAGACCACCATGGACACGGGCACCACCACGGGCATGGACATGGCCACCACCATGGGCACCACCACCACAGCACCTCCACATTCATTAGTGACAGTACTGAGTTCGCTTTCACTTTGTACAAACGCATTGCTGCTCAGCCAGATCAGAAAtcccaaaacatatttttgtctcCCTTGAGCATCGCAACTGCCCTCGCCACTCTGTCAGTGGGTGCAAGGGACCAGACCCATGACCAACTCTTTTCAGGCCTTGGCTTCAATGAAACAGAGATCAGTGAAACTGAAGTGAATGAGGCCTTTGAAAAAGTCTTCCAAAGTCTCAGGCAGAGGACAGAGCTGGAACTCTCAGTAGGCAGTGCATTATTTGCGGATGCAACTCTGAAACTCCTTCCTAAATTCCTGGAAGACATTAAGCGTTACTTCCATGCTGAGGGAATCACGACTGACTTCTCCAAAATCAGTGAGGCTAAAGATCAGATAAATAAGTATGTGGCAGAAAAAACACATGGCAAAGTCCCACATTTTGTAGATGACCTGAGTGAGGATACACTTACGTTCCTTGTTagttacatatatttcaaaGgTAAATGGGAAAAGCCTTTTGATCCTCAGTCAACACACGACGACGTATTCCATGTAGATGCTAGCACAACAGTCCCAGTGAAGATGATGAGTAAAACAAGCTACTTTGACGTATATTATGAGAGTGAGTCGGAGACTTCAGTTCTGAAACTCAGTTACAATGGATCGGCCAATATGTTGCTCATCACATCTGAAAAAGGAATAGACGATCTGGAGGAGAAATGGTGCCGGCAGCATTTGAAGAAATGGTTCAAAGGATTGAATAAGCAACGTTATAATGTGTTCCTGCCCAGATTTTCAATTTCTACATCCTATTCAATGCAAAAAGTACTGACTAAAATGGGAATGAAGGACATATTTTCATTAGATGCAGACTTTTCTGGAATATCTGATGAAAAACTGAAGGTTTCAAAGGTTATTCACAAAGCAACACTAGATGTGGATGAAGAAGGATCAGTAGCAACTGGAGTGACAGGTGTAGAACTGGTACCATTGTCTTTCCCTCCAACATTGAAGTTCGATCATCCTTTCCTTGTCCTCATCACAGATCGTGAAACCAGAAGTATACTTTTCATTGGAAAAATCGTCAATCCTACTGAAAAATAGAGCATCAGCTATTCCTCtaagaaataaatgcacatatatggtttacttaatttaatttgatttctctTTCATGTcatcacaataaaaaattgaGAAATGTCATCAA

Function

GO:

id name namespace
GO:0030162 regulation of proteolysis biological_process
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010433 True 1919 mRNA 0.40 5 29509642 29513418

Neighbor

gene id symbol gene type direction distance location
AMCG00010425 rfk coding upstream 192086 29315300 ~ 29317556 (+)
AMCG00010422 NA coding upstream 226052 29273211 ~ 29283590 (+)
AMCG00010420 NA coding upstream 258437 29249452 ~ 29251205 (+)
AMCG00010421 NA coding upstream 280659 29223316 ~ 29228983 (+)
AMCG00010423 NA coding upstream 402296 29095337 ~ 29107346 (+)
AMCG00010432 carnmt1,LOC107673371,LOC107599972 coding downstream 2341 29515759 ~ 29524516 (+)
AMCG00010434 NA coding downstream 14366 29527784 ~ 29551538 (+)
AMCG00010437 NA coding downstream 285822 29799240 ~ 29814090 (+)
AMCG00010441 NA coding downstream 335977 29849395 ~ 29864398 (+)
AMCG00010440 NA coding downstream 401175 29914593 ~ 29926083 (+)
G80599 NA non-coding upstream 25301 29483291 ~ 29484341 (+)
G80595 NA non-coding upstream 51664 29443110 ~ 29457978 (+)
G80580 pcsk5,LOC106580081,LOC107548272,LOC107723238 non-coding upstream 152612 29352154 ~ 29357030 (+)
G80567 NA non-coding upstream 206092 29298158 ~ 29303550 (+)
G80521 NA non-coding upstream 391584 29115832 ~ 29118058 (+)
G80652 NA non-coding downstream 258009 29771427 ~ 29775799 (+)
G80663 NA non-coding downstream 345355 29858773 ~ 29860382 (+)
G80746 NA non-coding downstream 793067 30306485 ~ 30307387 (+)
G80830 NA non-coding downstream 1003855 30517273 ~ 30519628 (+)
G80969 NA non-coding downstream 1533308 31046726 ~ 31070527 (+)
AMCG00010431 NA other upstream 6119 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 1244199 28242989 ~ 28265443 (+)
G80326 NA other upstream 1602813 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 1634711 27869439 ~ 27874931 (+)
G80249 NA other upstream 1952635 27556415 ~ 27557007 (+)
AMCG00010467 NA other downstream 1252919 30766337 ~ 30817603 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 2960615 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 4390397 33903815 ~ 33938237 (+)
G81496 NA other downstream 5188020 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 5243101 34756519 ~ 34845876 (+)

Expression


Co-expression Network