AMCG00010441


Basic Information

Item Value
gene id AMCG00010441
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 29849395 ~ 29864398 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010441
gaaataaacacaacatgacCACTGCCCCTGTAGACGGTCGGAACCATGACCTCAACCCCTCTACAGCTCCTCAGGACTCAGGGCTTCCTATTCCAATCAGTGATCTGGAAATCAAGTACAATAAGatatttattaATAACGACTGGCATGAGTCAGCCTGTGGCCGAAAAATCCCTGTGTACAACCCTGCCACTGGAGAGCAAATCTGTGAGGTGGAGGAAGGAGATAAAGAAGATGTTGACAATGCTGTGAAAGCTGCTAAAGAGGCATTTCAGCTGGGATCACCGTGGAGGTGTATGGATGCTTCAGAACGAGGGCGGCTGTTAAACAAACTGGCTGACTTAGTTGAACGAGACCGTCTAATATTGGCTACTATGGAAGCCATTGACTCTGGAAAAGTTTTCCTGATCTCTTACTTTGTCGATTTGATGgctgcaattaaaacattgcGCTATTATGGAGGGTGGGCTGACAAAATCCAAGGCCGTACAATTCCTGTTGATGGAGAGTATTTCACATTTACTAGACATGAACCAGTTGGAGTCTGTGGTCAAATCATACCAATCGctcctgctctgtgctgtggtaACACAGTGGTTCTCAAGCCTGCCGAGCAAACTCCACTCACCGCCCTCTACATGGGAGCATTAATTAAAGAGGCTGGTTTCCCTCAAGGTGTAGTAAACATTATACCAGGCTTCGGACCTACAGCAGGAGCAGTAATAGCAAACCACATGGAAATAGACAAAGTGGCATTTACTGGATCAACTGAGGttggaaaattaattaaaaaagctgcTGTGGAGCATGCAGTCGAACAGGCCCACCACGGTCTGTTCTTCAATCAGGGCCAGTGCTGCCTAGCAGGATCCAGGGTTTTTGTAGAGGAGCCAATTTACGAGGAATTTGTACGTAAGAGTGTGGAGAGGGCCAAGAAGCGTATACTGGGAAACCCTTTAATCCCTGGAGTGGATCAGGGGCCTCAGATTGACAAAAAGCAGTTCGACAGAATCCTGGAGCTGATTGAAAGTGGGAAGAAGGAGGGGGCCACGCTAGAATGTGGGGGATCCTCCTGGGGAGAGCGGGGCTTCTTCATTCAGCCAACGGTTTTCTCCAATGTAACCGATGACATGCGCATTGCCAAAGAAGagATATTTGGGCCCGTTCAGCAAATCATGAAGTTTAAAACCATAGATGAAGTTATTAAGAGAGCCAATGACACCCATTATGGTCTGGTTGCAGGAGTTTTTACCCAGAATCTGAACAAAGCACTCACCATTGCATCAGCCCTTCAAGCTGGAACTGTGTGGGTTAATTGCTACAATGCAATGAGTTCTCAGAGTCCTTTTGGAGGCTTTAAAATGTCTGGAAATGGAAGAGAAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010441 True 1385 mRNA 0.46 12 29849395 29864398

Neighbor

gene id symbol gene type direction distance location
AMCG00010437 NA coding upstream 35305 29799240 ~ 29814090 (+)
AMCG00010434 NA coding upstream 297857 29527784 ~ 29551538 (+)
AMCG00010432 carnmt1,LOC107673371,LOC107599972 coding upstream 324879 29515759 ~ 29524516 (+)
AMCG00010433 NA coding upstream 335977 29509642 ~ 29513418 (+)
AMCG00010425 rfk coding upstream 531839 29315300 ~ 29317556 (+)
AMCG00010440 NA coding downstream 50195 29914593 ~ 29926083 (+)
AMCG00010448 abhd17b,LOC103022021,LOC107599913,LOC106580059 coding downstream 117792 29982190 ~ 29983125 (+)
AMCG00010447 NA coding downstream 127534 29991932 ~ 30021803 (+)
AMCG00010449 LOC107393780,LOC105014492 coding downstream 322538 30186936 ~ 30208135 (+)
AMCG00010446 trpm3,LOC108434489,LOC108255677 coding downstream 361293 30225691 ~ 30253139 (+)
G80652 NA non-coding upstream 73596 29771427 ~ 29775799 (+)
G80599 NA non-coding upstream 365054 29483291 ~ 29484341 (+)
G80595 NA non-coding upstream 391417 29443110 ~ 29457978 (+)
G80580 pcsk5,LOC106580081,LOC107548272,LOC107723238 non-coding upstream 492365 29352154 ~ 29357030 (+)
G80567 NA non-coding upstream 545845 29298158 ~ 29303550 (+)
G80746 NA non-coding downstream 442087 30306485 ~ 30307387 (+)
G80830 NA non-coding downstream 652875 30517273 ~ 30519628 (+)
G80969 NA non-coding downstream 1182328 31046726 ~ 31070527 (+)
G80988 NA non-coding downstream 1242662 31107060 ~ 31107603 (+)
G80989 NA non-coding downstream 1245370 31109768 ~ 31110142 (+)
AMCG00010431 NA other upstream 345872 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 1583952 28242989 ~ 28265443 (+)
G80326 NA other upstream 1942566 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 1974464 27869439 ~ 27874931 (+)
G80249 NA other upstream 2292388 27556415 ~ 27557007 (+)
AMCG00010467 NA other downstream 901939 30766337 ~ 30817603 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 2609635 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 4039417 33903815 ~ 33938237 (+)
G81496 NA other downstream 4837040 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 4892121 34756519 ~ 34845876 (+)

Expression


Co-expression Network