AMCG00010456


Basic Information

Item Value
gene id AMCG00010456
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 30607329 ~ 30611581 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010456
tgtgcaatttattttcttttattttgaattattcaagccaaaatataattaattaagctTATTTCATCTAGTTATTATAGCTTCTAatgtaaaaatgattttgtacTCCTCTACTTTTCCTGACTGTAGTCATGCAAATATCATATATGAAGAACCACATTACTCACTAACCTCTGTATTAATTAACAATACTTGCTGGTAGCACATTATCACAGAATAATATTAATCTGcgtattttgaaatgcaattgatgATTAATTTTATGTATGGCTCTTTTGTTGTATACAGTATTCAAgacaaatatacatatgaaacacaatgcattcaaaaaagccaatgcaatatataagtaaacaaatacacaaataaataaataataataataataataaagctctTGCACATATTCTGTCCCATTGATCACAGAAAACATACTGTAAACTTTGCTGTATTGTGAAAAACATGCACTGTAAAGAATGAGCCAGATCCCTATAAAATGCTTGTAAACATATCTCTTGCTAGTTGCTCTTTTGAATGGAATTTTTTGACCCCAGTGAGTTGTTTTGAGCATGGAGTTACATTGTGTTCTGCAGTGCAAACTGATACTGTCATGCCTGTTTAGCAGATTTATTAATGAGCAACGACTTTGTATTGGATTGTTACGTCACCTCACATGGCAAAGGCCACCTCCTGGTATAGTATAAAAAGAACATGCGATGAGGTTATAACATGCAATCACCCAGGAAACTCCTACAGAGCAATTGAAAATGGAAGTGGAAAGGCAGATATGTTTTCTAGTGCGTATGGCTCTGCCTGTGGTTGGCTTCTCAATAATATGCTTAGGAGCCTTCCTCATCTCTGTGGCGAATACAGGTGCTTGTACAGTAAAACTCATACTTGCCTATATTTGCATAACATTCGGTTTTTTAATTCTCTTGGCTGGAATTTCGTGGAGCATCTGCCTTGGAATGAAGAACAAAAGATTTATACACAGCGTGACGCGACATCAAAACCCTACGGTGTTAATCCACACAGTGTACAGACCTGATTTCTACCCGCCCTCGTATGCAGAGTCTATGGGAGGAAACACAGTGTCTGCTGTGGGACGTGTTGTCATCGAAGACGGAATTCAGTGTATCGCTCCACCCATTTACACAGAGAGCAGTTCGGGCATTGTGGATCAGTCCTTCAGTCTAGAAGAACCGCCATCCTATGAAGAAACTATGACTCGAAACAACACTCTGGAAGCACAATATCCTGTTCAGGCAGCTTCTGATGAGAATTAATCATTTAACACAGACTTCCTGATGTTAACACTATCAACATTTTACTATGTGCATGGCTGCATTTTGTATGAAATGCATGCCTGCAGCCACACTGTAATGTTGAGTTGCATGTTGTAAAGCTGAAGAGAGCCCAGGCACTGTAATTAGGAGAATGGAAAATATGTCCCATTCCTCTGAGGAGAATGTGCAATAAGTGTATGAGTGCAGGGGCTGTTCTAGAGAAGCAAGCTCAGTAAGAGATGAGATGTGTGGAAGATGACCGTGATTTAGGGTGGGTCTACACAGCAGTGCTGGAAACATGTAACTCTTGAGTTGATGTCCAGCAAACAGCAGCAAACAGGAGCACATGGTAATGAAAAcatatcacatttattttcaagagtCTGAGTCAAACATAGATTCCTGACCAAGACAGTGATGGTCAGTGACTCTTCCAGCATTTCTGTACAtctttaaatcaatgtattgctACAGACATCAAGCCTGTATCAAGATGTTTGTCTTCAGTGTAGAGGCACTGTACTTGATCTGTACTCACAAAATGGAGAAGGGCATACTTTCCACGCAGCCCCACGTATTTATGAACTGCATGTAATCAATCAGAGGTGTTCATTAAAATGTCCAGTAAAGATAAGTAAAGTGCTGGAGTTTGATTAATCACACCAAAGAAGATAAACGGGTTTCTGGAGGCACAGCATATGTACATGCTTGTTTCATGGTTGAACATTTACTTCAATGTTTTCTAGCTGTAACCAAGTGGTCAAAGCCATTCCACCAAGCAACACTGATGGCTGTATTTATGAAAGCATCCTCTCATTCGTGCTTTTTGCACACTTGTTTATTGTCAagaaatgataactggtaacttgctttatttattaattgccTGTACTTTCTGAAACACCCTTGTAGAgcatatgtatgtttatgtgaAGATACTCATTATGATTAATGTTTGctgaaaaaaatgtacaaattcaaGCACAcatatttttagtttgaatttCAAAGTTTTACCTTTTATACAAAAAAGAGCCAGTTCAAATGATGTTCTctatgtattgaaaaaaactaaattgttgtCTTTTCCCATCCTGTGTAAACACACTGTAGTCAATTGCTTGAATTGTGTGTAAATACTTGACAATTAATGtctaatgattttaaaatgtaagaagCAATCTGAAGCAATGTGTGTCAATAAATAACTTCAATTTAAAGAGATATACTGGTCTATTTATCCGATTAATCATAATTCTTCAAATGAAGGAGCTTTCCAAACTGTGAAATGTGAGGAGGGATCTTGTAGAATAACGGGCACCTGTAGAACACTGAACTGCAATGACCACAACAGAGAAGTGAATATCCTCTCCGAGGGCCTTGAACAACATGGGAGGCCAGTGTCTGGCCTATTCTGTTAAAACTGAACTCCACCGTGATGATGGCGGTTCATCTGCCTTCAGTATTTAGCACTGATATTTTCAAGTCCTTAAGTTTCATACCCAAAAGATGAGGACTCTGTTGTTTTACCTCTTAGAGATTACTATCCCCATATTGTATAATACAAGATAGCTTGGTCCTCTTTTAATGTCCGTCTTGGCTAACTGTGGGAAGCCCAGTTTCATCATTACCCCACACAAGTGGAAGGCAGCTCATTACCTAAATCTAAATCTAGATCAAAATCACAAGGCACACTAGAGTAGTGTTGTGGCTCATGACCCAGCATCCTGTAGGTATTCCCCAAACCAGTTACTGCCATGAGAAACCAGCCACCCTTTACTGCCTCTGTCTCTTGTTCTGCATGGTCATCATGTGAGACACTAGATTCCACAGCAGTGTGGATCTCTGATGTGGAATAGAGACCACCATTGGGTTGGCctataataaaatggaaaatgtttaaatgtggtTATTTGTTATGCAAGTTAAAGAGCTGTTGTATTcctgtaaatatatttagaatagttcccaattaatatatatatataatacacattttcacacaaaagGGGTTTATTTCATtccattttgttaaaaaaaattaaatatagcaaatgtgaatttaatttaaaatgcacctaataaaacaaacaggataGCAAAAAAAATATGCAGTAGTGTTTTGTCTCaggaatataaaacattgtttcaacAATTACTTACTGCAGTATTCATTCAGAGCCTCCCTGAAATAATTCATGTTCCCCAAAACATCCAtcaaaaaactgtaaatgttaaCTATTGTGACAATTATAAAATCACtgtatcaaattatatataggAACTTTAATATACTTCAGTTTCAAAGATTACAAAGAATtcacaaatacaagaaaaaaaaatctaacttttGGTAACAATTCAACACAAAGTGAAAAGCTCAGTGTAAAAAGGGTAGTTTACTTGAAAACACTGAGAGAAAATctgttg

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010456 True 3716 mRNA 0.36 2 30607329 30611581

Neighbor

gene id symbol gene type direction distance location
AMCG00010457 unc45b coding upstream 4436 30585941 ~ 30602893 (+)
AMCG00010455 apba1,apba2 coding upstream 178017 30403504 ~ 30429312 (+)
AMCG00010450 LOC106943757 coding upstream 262514 30331993 ~ 30344815 (+)
AMCG00010445 NA coding upstream 335666 30264723 ~ 30271663 (+)
AMCG00010446 trpm3,LOC108434489,LOC108255677 coding upstream 354190 30225691 ~ 30253139 (+)
AMCG00010468 NA coding downstream 75386 30686967 ~ 30697621 (+)
AMCG00010469 NA coding downstream 97109 30708690 ~ 30735073 (+)
AMCG00010470 NA coding downstream 127612 30739193 ~ 30758800 (+)
AMCG00010474 NA coding downstream 280804 30892385 ~ 30927540 (+)
AMCG00010475 NA coding downstream 382022 30993603 ~ 31012828 (+)
G80830 NA non-coding upstream 87701 30517273 ~ 30519628 (+)
G80746 NA non-coding upstream 299942 30306485 ~ 30307387 (+)
G80663 NA non-coding upstream 746947 29858773 ~ 29860382 (+)
G80652 NA non-coding upstream 831530 29771427 ~ 29775799 (+)
G80599 NA non-coding upstream 1122988 29483291 ~ 29484341 (+)
G80969 NA non-coding downstream 435145 31046726 ~ 31070527 (+)
G80988 NA non-coding downstream 495479 31107060 ~ 31107603 (+)
G80989 NA non-coding downstream 498187 31109768 ~ 31110142 (+)
G81020 NA non-coding downstream 947135 31558716 ~ 31627547 (+)
G81026 NA non-coding downstream 1160573 31772154 ~ 31772357 (+)
AMCG00010431 NA other upstream 1103806 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 2341886 28242989 ~ 28265443 (+)
G80326 NA other upstream 2700500 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 2732398 27869439 ~ 27874931 (+)
G80249 NA other upstream 3050322 27556415 ~ 27557007 (+)
AMCG00010467 NA other downstream 154756 30766337 ~ 30817603 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 1862452 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 3292234 33903815 ~ 33938237 (+)
G81496 NA other downstream 4089857 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 4144938 34756519 ~ 34845876 (+)

Expression


Co-expression Network