AMCG00010470


Basic Information

Item Value
gene id AMCG00010470
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 30739193 ~ 30758800 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010470
ATGGAGATGAACCTGGACCCCAGTAAAGATGATCTGCCCCTCAGAGCCAACACTAACCACATGCTAGTAAGACACTATGTGCTGGACTTGGCTGTGCACTTTGAAAGAAAGGTCATCAGTGGCAACGTGGTCCTTTTCTTTGAAACCGGGAAAGGTGGCCATAAATTATGTAATACTGAGGCAAGCGAGCCCCTTCCCCAAAGGCATTCGCCGCACAGTGGAGTGGAGACACCTGATCGGTCGCAGTTCCCTTTGAAAGGTGTGAGTGCTTATTCAGCTTCATCTGACACTACTGATGCCGGTGGAAGTGACGGAAAGGATACCTTGGGTGAAAACAGTTGCCATGGTGACTCGCAGTTGACATCTCTTTCCAGTACAAAGCAGGACTGCAGCGAGAGGGAGGATTTTGTCCTGGTGTTAGACTGTTGCGATCTGTCAGTGAGCAAGGTTGAAGAGGTCGATGTGACCTCCGTGAGAGGTGTCCAGGAGCTGCGAAGCGGTTGTGTGGAAGAGGATCTTGCACACGGGGTGACAGACTGTCTCCGGAGTCACAGCGTGCAGAAACTTGTCACTCTACCGGCAGAATGCTGGGAGGAGCAGCATGACTTATACATGCAGTGCAGTCAAGCTCCAGGATGTGGGGACCTTTCCTTTGAGACTGATTCATGGAGTCTACAAATCCGAAAGGAGGGAATTCACTCTCCCTGTGACTTCCCTCATGCCTTGAGGATCTATTATGAAACCATGCCTGAGGGCGCGTCAGTTAGGTGGACCAAAGACCAAAGTGGCAGAGCCTGCGTGTACACTGTGGGGTCTCCCATTAACAACCGGGCCCTCTTTCCATGTCAGGAGCCCCCAGTTGCCATGTCAACATGGCAGGCTGCTATTGAGGCGCCGCCGGAGTGTGTAGTTCTGTTGAGTGGAGAGAAAGAGGCCCAACCTGCCCGGCACAAGGAAGtTTCGTCCCAGTGGTTTTATTATGTCACGATGCCAATGCCCGCATCCACTTTCACCATAGCAGTGGGCCACTGGATTAAGGCGGAGAGAAAAGAAGCATCGAcagcagacagagagactgTTCCCATTCCTGCAGAAGCTTGCAGTTTGACGGAGACGCCGTGCCACCATGTGGATTACCCGTGCCGTTTCCAGAGGCGGGAAGCTCAGGTGCAGGCCGTGATTCCTCACCGAGTGTTTGCTCCGGCCTGTCTACGGGAGCAGGCAGAAGACGTGTTGCTTCCCCTGCTGCCTTCCTGCCTGTCTGCGGCGCATTCTGTCCTGGGCGCCCACCCCTTCCCCAGACTGGACGTGCTGATTGTCCCCACCGGCTTCTCCAGTCTAGGAATGGCAAGCCCGCACATAATGTTTCTGTCACAAAGTGTATTATCTGGGAAGAATAACCTCTGTGGAGCCCGGTTGTGTCACGAAATTGCCCACGCCTGGTTTGGACTGGCAATTGGTGCCCAGGATTGGACAGAAGAGTGGATCAGTGAGGGTTTTGCCACCTACTTGGAAGATGTATTTTGGGCTCGTGCACAACAGCTTTCCCAGAAGGAAGCACAGGAGTTGTGCCAACTCAAGGCGCTCTTGCGCTGGAGGCGTCTTCGAGACGAACTCCAAAACTCTGAGGAGGAGCTGCAAATTCTGAGGCCAAACAGAGAACGGACTGGGGAGGTGAGTGACTCGGGTGCCTCCCTAGTCAAACATGCACTCAATCCAGGAAAAGTCTTCATGCAGGTTCACTATTTAAAGGGATACTTTCTTCTCCAGTTTCTGGCAAGTAAAATAGGAGAAGATCTGTTCCTTCAgttcttttgccattttgtgcATGAATTTCATGGTCAGCTCATTCTGTCTCAG

Function

GO:

id name namespace
GO:0044238 primary metabolic process biological_process
GO:0071704 organic substance metabolic process biological_process

KEGG:

id description
K09606 C9ORF3; aminopeptidase O

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010470 True 1860 mRNA 0.53 8 30739193 30758800

Neighbor

gene id symbol gene type direction distance location
AMCG00010469 NA coding upstream 4120 30708690 ~ 30735073 (+)
AMCG00010468 NA coding upstream 41572 30686967 ~ 30697621 (+)
AMCG00010456 NA coding upstream 127612 30607329 ~ 30611581 (+)
AMCG00010457 unc45b coding upstream 136300 30585941 ~ 30602893 (+)
AMCG00010455 apba1,apba2 coding upstream 309881 30403504 ~ 30429312 (+)
AMCG00010474 NA coding downstream 133585 30892385 ~ 30927540 (+)
AMCG00010475 NA coding downstream 234803 30993603 ~ 31012828 (+)
AMCG00010476 NA coding downstream 278840 31037640 ~ 31040193 (+)
AMCG00010477 NA coding downstream 305837 31064637 ~ 31071620 (+)
AMCG00010480 NA coding downstream 324083 31082883 ~ 31087934 (+)
G80830 NA non-coding upstream 219565 30517273 ~ 30519628 (+)
G80746 NA non-coding upstream 431806 30306485 ~ 30307387 (+)
G80663 NA non-coding upstream 878811 29858773 ~ 29860382 (+)
G80652 NA non-coding upstream 963394 29771427 ~ 29775799 (+)
G80599 NA non-coding upstream 1254852 29483291 ~ 29484341 (+)
G80969 NA non-coding downstream 287926 31046726 ~ 31070527 (+)
G80988 NA non-coding downstream 348260 31107060 ~ 31107603 (+)
G80989 NA non-coding downstream 350968 31109768 ~ 31110142 (+)
G81020 NA non-coding downstream 799916 31558716 ~ 31627547 (+)
G81026 NA non-coding downstream 1013354 31772154 ~ 31772357 (+)
AMCG00010431 NA other upstream 1235670 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 2473750 28242989 ~ 28265443 (+)
G80326 NA other upstream 2832364 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 2864262 27869439 ~ 27874931 (+)
G80249 NA other upstream 3182186 27556415 ~ 27557007 (+)
AMCG00010467 NA other downstream 7537 30766337 ~ 30817603 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 1715233 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 3145015 33903815 ~ 33938237 (+)
G81496 NA other downstream 3942638 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 3997719 34756519 ~ 34845876 (+)

Expression


Co-expression Network