AMCG00010474


Basic Information

Item Value
gene id AMCG00010474
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 30892385 ~ 30927540 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010474
ATGAAGCCTTACCTGACAAAACAACAGAAGATGTCCAGGCGTCGGTCTTCCCGCCTGTATAGATCCATGCTCAGAATAGCAGGAAAGATGAGCAGGACCATGGCAAAACCACCCAAGGAGAGGGCGTACCGCAGAGCCCGGAGATACCAGGGGCCCACAGCCATGGAAGCTCCGATTGCTATCTCCCACTGTCCCAGAGAGGCTCACGAGGCCATGACAGCCACCATTCAGCGCACGAGCAACGTCATAGGGCTGCAAGACAACAAGCGCAATTTGAGGATGAAAAGGAACAACGCTCTGCAGACGGTACTGACTGAGACTCTGCGTGCCTTTTTCAAGGACCACATTGCAACTTCAGACCACCATCCTGCAAACACAGCAGAGCTGAAAGTTCAGCAAGCCTCTCATGGGCAAGAAGAGGAGTCACTCATCCAGGATGTACCCACGCGCTGGAATTCAACTCTCAAAATGATAAACCCCCACATCCTACCCTCCACCCTCAAAAAATGTCCTTTGGCAGCTGCTGAAAGTGCCATCTGTTGCAGCCAAAGCAAACGGTGCTTTGAAGAGGTGCAGTGTGAAGTGTATCTGCTCTCCCTGTCAGCCACAGCCAGGTCAGGTCAGCACTCCTCCAGCCCTGAGCCTGCTGAATGTCATGACTCCCACCCGGACAATATTTCTTACAGGACCACCAGCTCTCCAATCCCCACCACCCCGCACACAGCCACACAAAGCTCATCGTACCGTACAACTATCATCGCCAAACTCCTCCGCCACACGGATAATCTCCATGTGATTACCACAGGAAATGGGTTCTTCCACTAa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010474 True 825 mRNA 0.53 8 30892385 30927540

Neighbor

gene id symbol gene type direction distance location
AMCG00010470 NA coding upstream 133585 30739193 ~ 30758800 (+)
AMCG00010469 NA coding upstream 157312 30708690 ~ 30735073 (+)
AMCG00010468 NA coding upstream 194764 30686967 ~ 30697621 (+)
AMCG00010456 NA coding upstream 280804 30607329 ~ 30611581 (+)
AMCG00010457 unc45b coding upstream 289492 30585941 ~ 30602893 (+)
AMCG00010475 NA coding downstream 66063 30993603 ~ 31012828 (+)
AMCG00010476 NA coding downstream 110100 31037640 ~ 31040193 (+)
AMCG00010477 NA coding downstream 137097 31064637 ~ 31071620 (+)
AMCG00010480 NA coding downstream 155343 31082883 ~ 31087934 (+)
AMCG00010483 NA coding downstream 186982 31114522 ~ 31119247 (+)
G80830 NA non-coding upstream 372757 30517273 ~ 30519628 (+)
G80746 NA non-coding upstream 584998 30306485 ~ 30307387 (+)
G80663 NA non-coding upstream 1032003 29858773 ~ 29860382 (+)
G80652 NA non-coding upstream 1116586 29771427 ~ 29775799 (+)
G80599 NA non-coding upstream 1408044 29483291 ~ 29484341 (+)
G80969 NA non-coding downstream 119186 31046726 ~ 31070527 (+)
G80988 NA non-coding downstream 179520 31107060 ~ 31107603 (+)
G80989 NA non-coding downstream 182228 31109768 ~ 31110142 (+)
G81020 NA non-coding downstream 631176 31558716 ~ 31627547 (+)
G81026 NA non-coding downstream 844614 31772154 ~ 31772357 (+)
AMCG00010467 NA other upstream 74782 30766337 ~ 30817603 (+)
AMCG00010431 NA other upstream 1388862 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 2626942 28242989 ~ 28265443 (+)
G80326 NA other upstream 2985556 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 3017454 27869439 ~ 27874931 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 1546493 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 2976275 33903815 ~ 33938237 (+)
G81496 NA other downstream 3773898 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 3828979 34756519 ~ 34845876 (+)
G81576 NA other downstream 4084775 35012315 ~ 35012693 (+)

Expression


Co-expression Network