AMCG00010477


Basic Information

Item Value
gene id AMCG00010477
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 31064637 ~ 31071620 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010477
ATGCAGGTTTCCACGTCAGTTTCGTTACCTGATTCAGAACAAGTGCATTCTAGATTAGTTAAAGTTCTCTCAGCGATGTTTTATGCCGCCAGCTCTTTTCTCATTATTCTAGTGAACAAAAACATCCTTACAAACTACAGGTTCCCTTCTTATCTCTTCCTAGGGATTTGTCAGATGGCGACAACAATACTTGTACTCTACACTGCAAAACTGACTCAAACTATTAGTTTTCCAGATTTTGACAGAAATATACCTTATAAGATTTTTCCACTACCACTTCTTTATGTTGGGAATCATGTGACAGGACTGGCAAGCACAAAGAAATTAAGTTTACCAATGTTCACTGTTCTGAGGAAATTTACAATTCTAATGACAATGATCCTTGAATCAAGACTGTTAAGCTCGGAtcttgcttttgattttgaaggATACATCTTCATTTTTCTCAATGACCTGTTCACAGCTGCCAGTGGAGTGTACACCAAAAAGAAACTTGACTCCTCTGAGGGTCTTGGAAAATATGGGGTGCTGTTCTACAATGCATGCTTTATAATAATACCTACCATCCTAGCAAGCTTGTATACCGGAGACCTGCAAAAGGCCATTGCTTTTGATCACTGGATGAAATACACCTTCGTTTGTCACTTCCTGTTGTCTTGTATTTTGGGGTTTGTTCTGATGTATTCCATCGTGCTTTGCAGCCATTACAACTCGGCCCTCACAACTACAaACGTGGGTGTGGCTTACATCGGCATGTTTGTGGGGGGAGACTATCATGTCTGGAGGGCTCACGTATTCCTTCTTTACGTTCCGAAGCAATTCACGCATTTCAACTTCAACATCCGGCAGTGATCATGAGTTAAGCAAAGGTCAAAGTACTTAATGTTCAGATGGCATTACAGATCATTCAAAAACCGTGAATGTGTTCATATGACACCTGTTTTTGCAGAAATTGTTAGTCTCAAAACACTTTTATGGAGCTGTGTTGACGACATTATCCATCCCTGgttttgtttacaaatattgttttgccTTTATGGTGCGTTTATGGAGTgtactaaactaaactaaaggcaaaacgccccaagaacaagcaggaactaaagacagctgcagtgcaggcctggcagagcatcaccagggaagaaacccggtatctggt

Function

GO: NA

KEGG:

id description
K15281 SLC35D; solute carrier family 35

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010477 True 1162 mRNA 0.41 11 31064637 31071620

Neighbor

gene id symbol gene type direction distance location
AMCG00010476 NA coding upstream 24444 31037640 ~ 31040193 (+)
AMCG00010475 NA coding upstream 51809 30993603 ~ 31012828 (+)
AMCG00010474 NA coding upstream 137097 30892385 ~ 30927540 (+)
AMCG00010470 NA coding upstream 305837 30739193 ~ 30758800 (+)
AMCG00010469 NA coding upstream 329564 30708690 ~ 30735073 (+)
AMCG00010480 NA coding downstream 11263 31082883 ~ 31087934 (+)
AMCG00010483 NA coding downstream 42902 31114522 ~ 31119247 (+)
AMCG00010486 LOC104966306,LOC106585191,LOC100702629,LOC103397673 coding downstream 358089 31429709 ~ 31589396 (+)
AMCG00010484 NA coding downstream 844964 31916584 ~ 31921133 (+)
AMCG00010485 NA coding downstream 853302 31924922 ~ 31938388 (+)
G80830 NA non-coding upstream 545009 30517273 ~ 30519628 (+)
G80746 NA non-coding upstream 757250 30306485 ~ 30307387 (+)
G80663 NA non-coding upstream 1204255 29858773 ~ 29860382 (+)
G80652 NA non-coding upstream 1288838 29771427 ~ 29775799 (+)
G80599 NA non-coding upstream 1580296 29483291 ~ 29484341 (+)
G80988 NA non-coding downstream 35440 31107060 ~ 31107603 (+)
G80989 NA non-coding downstream 38148 31109768 ~ 31110142 (+)
G81020 NA non-coding downstream 487096 31558716 ~ 31627547 (+)
G81026 NA non-coding downstream 700534 31772154 ~ 31772357 (+)
G81029 NA non-coding downstream 850129 31921749 ~ 31922050 (+)
AMCG00010467 NA other upstream 247034 30766337 ~ 30817603 (+)
AMCG00010431 NA other upstream 1561114 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 2799194 28242989 ~ 28265443 (+)
G80326 NA other upstream 3157808 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 3189706 27869439 ~ 27874931 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 1402413 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 2832195 33903815 ~ 33938237 (+)
G81496 NA other downstream 3629818 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 3684899 34756519 ~ 34845876 (+)
G81576 NA other downstream 3940695 35012315 ~ 35012693 (+)

Expression


Co-expression Network