AMCG00010480


Basic Information

Item Value
gene id AMCG00010480
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 31082883 ~ 31087934 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010480
CGCAGGGGTCGAGTCGTACATAAAGAAACCGCCATGTTGTCAGTTCACCTGTTAACCTGCAGCATCATCAGCGACACAGGCAGCGGAAAGTGAGGGTAGGAATTACAGACAAACAGAGGATGAACGCGTCGGTCCCCCTCAGCTCCTAAAGCAGAGCAAGAATTTGGACATTTTCTGCAGCCCCCCCGCGGTGGAATTAGGTTTTGAGCAATTTCGTTGGCAATGAAGGCAGTGGTCAGCAGCCCGGTCTCCCCCATCATGCAGGAGAGTTTCGGGTGCGCCGTGATGAACCGCTTTGAGCAGCTGCTGGATGACGAGGCGGACCCCTTCGACATCCTGCGGGAGGCCGAGGCggacaaaaagaagaaaaagaagaaggaagagaagaaagGCAGCGGCAATGCGGCGAAATCCGGCAAGAGGGAATCCCAGAAAGACCGAAAGATCCCCGTGTTTCTCGGAGGCGACGGTGATGACGCGCAGGCGAGGAGCACTATGGTTCCTGGCCAAAAGCGCCCCCCTCGAGGCCCTGGGCTCTTGGGCCAGAACGAGAACCGAGGGATGGAAGTGAAGGTGGAGCGCAGTGAGAGGCGCGTGGTGTTCAGGGAGCGGCGGCCCAATGAGCTTGAAGCTCCTCAGGAATTCTCTGTGGAGAAGCCGCTGGAGCAGGTTGACAGAGGGATGCGGGGCCGCGGGGGAGGCCGAGGAGGAATGCGAGGCAGGGGAGGGAGAGGTGGTGGATTTCCCCGGAATTTCGATGGGTTTGACCAGAGGGGCAAACGAGAATTTGAACGCCACAGCGGAAGTGACCGAGCGGGTATTAGGCCTGAGGAAAAACGTGGAGGAAATGGATCTCGTAACTGGGGATCTGTAAAAGATGAAATGAgTGAAATGGAGCAGAGTGCCCCAAATGAGGAGGCTGGAGATGCCGAAGAGGCTCCTGATGTCCCCGAGGCAGACCCAGAGAACCGTGGCGTGGACGGTGACGGAGAACCATTTGACGAAGTTGCTGTGGAGATGACTCTGGATGAGTGGAAAGCGCTACAGGCACAAAGTCGGCCAAAGAAGGAATTCAACATTCGCAAGCCAGAGACCAGCGTGCCTTCCAAGGCTGTTGTGATTCACAAGTCTAAATACATCGATGAACTGAAAGGAGAATCTgacgaggaggatgaggatcACCACTACTTCCGGAGGCCAGCCAATGACATCACCTCCCAGTTGGACATTAACTTTGGCAGTCTGTCCCGGTCAGGCCGTGGGGGCCGTGGAGGGCGGGGTGGGCGAGGCCGTGGGGCGGTTGCTAGGCCGGAGGCACCCCCACGCCCTGAAGTGCCACAAGTTCTGGCTCCCAACCCTGATGACCCAGAGGATTTCCCAGCCCTGGCCTGAGGTTGGACTGAAGAGGCTGGAGTGTATTTGGGAGCTTGTGATATGGTGTTGAATTTGAAAGTGACTGACCAAGCCTCCCAGCTGCTGAATTTTGCCTCTTGATTAATTGGTTGCACTTGTGACTAACACAATGGTTTTTGTTCATAACTGTTACAaagaactatatatttttcaaagcattaatGTCTGCTTACTGTATAGTTTGAAAGCTGTAACTCACTGTAATGGGAAATCTAAATACAATtgaactgtataaataaatgcactatTGAGAATGGGACTTGATTCTTCCTGCTTGTAAAGGGGGGCCAGCAAGATGAACACCACTCCTTTCTGCACTTTAGTGGGTGAACCATTCCACTAGATGTGTAAAGGTCTGCTTCAAGGGATGTTTTCTTGAATGGTAAAGTCAGGGGGAAGTGTAATTTATGCTGCTTTGGCTTTTTGAGTGGC

Function

GO: NA

KEGG:

id description
K19019 HABP4; intracellular hyaluronan-binding protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010480 True 1845 mRNA 0.53 8 31082883 31087934

Neighbor

gene id symbol gene type direction distance location
AMCG00010477 NA coding upstream 11263 31064637 ~ 31071620 (+)
AMCG00010476 NA coding upstream 42690 31037640 ~ 31040193 (+)
AMCG00010475 NA coding upstream 70055 30993603 ~ 31012828 (+)
AMCG00010474 NA coding upstream 155343 30892385 ~ 30927540 (+)
AMCG00010470 NA coding upstream 324083 30739193 ~ 30758800 (+)
AMCG00010483 NA coding downstream 26588 31114522 ~ 31119247 (+)
AMCG00010486 LOC104966306,LOC106585191,LOC100702629,LOC103397673 coding downstream 341775 31429709 ~ 31589396 (+)
AMCG00010484 NA coding downstream 828650 31916584 ~ 31921133 (+)
AMCG00010485 NA coding downstream 836988 31924922 ~ 31938388 (+)
AMCG00010495 NA coding downstream 1021973 32109907 ~ 32126004 (+)
G80969 NA non-coding upstream 12356 31046726 ~ 31070527 (+)
G80830 NA non-coding upstream 563255 30517273 ~ 30519628 (+)
G80746 NA non-coding upstream 775496 30306485 ~ 30307387 (+)
G80663 NA non-coding upstream 1222501 29858773 ~ 29860382 (+)
G80652 NA non-coding upstream 1307084 29771427 ~ 29775799 (+)
G80988 NA non-coding downstream 19126 31107060 ~ 31107603 (+)
G80989 NA non-coding downstream 21834 31109768 ~ 31110142 (+)
G81020 NA non-coding downstream 470782 31558716 ~ 31627547 (+)
G81026 NA non-coding downstream 684220 31772154 ~ 31772357 (+)
G81029 NA non-coding downstream 833815 31921749 ~ 31922050 (+)
AMCG00010467 NA other upstream 265280 30766337 ~ 30817603 (+)
AMCG00010431 NA other upstream 1579360 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 2817440 28242989 ~ 28265443 (+)
G80326 NA other upstream 3176054 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 3207952 27869439 ~ 27874931 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 1386099 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 2815881 33903815 ~ 33938237 (+)
G81496 NA other downstream 3613504 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 3668585 34756519 ~ 34845876 (+)
G81576 NA other downstream 3924381 35012315 ~ 35012693 (+)

Expression


Co-expression Network