AMCG00010517


Basic Information

Item Value
gene id AMCG00010517
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 33601543 ~ 33608079 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010517
CTCCAGAAGTAAAAGGCATGTGCTGTCAAATTAACTCCACCCTGTTCGGGAGCTGGGGAAGTAGAAGTGTAAGGAAGAGAATCTGTTTGCTGATTACACTTGAGACAGCAGAGCTTGTCTCAGACACTGGGCTGTAGTCGCATTTGTGGGAGATGGAATCCACTTTCATGCACCGATATTTCATTTGCTGACTTCACAGAATTTGTTAAACTTGGACTGGccctccttttttttaaatttgggtACGGAAGTTAAATGCTTCTGCTTTAAGTGCACATCGGCTGCATTCCAGTCTCCGTGTGTTCCACCACAAGCATGAGCTCTGAAGCAGATGAAGTGGCCACAGATGTCTTCAATTCAAAGAGCCTGGCGGTTCAGGCGCAGAAGAAGATTCTGGGGAAAATGGCCTCCAAGTCCATCGCCACCATCCTGATAGATGACACCACCAGCGAAGTCCTGGACGAGCTCTACCGAGTGACCAAGGAGTACACACAGAGCAAGAAGGAGTCCGAGAGGATCACCAAGAACATCATCAAGATCGTCATCAAGCTGGCGGTTTTGTTCAGGAACAACCAGTTCAACGAAGAGGAGGTTGCGCAAATGGagaagctgaagaaaaaaatccacGTTTTGGCCATGACTGTCATCAGCTTCCACCAGGTCGATTACACCTTTGACCGCAACGTTCTCTCCAAACTGTTGAACGAATGCAGGGAGTTGCTTCACACGATCATAAACCGGCACCTCACAGCGAAATCCCACGGACGCATTAACAATGTGTTTGATCATTTTTCGGATTGCGAGTTCCTAGCCACGTTGTACAACCCTTTTGGACCGTATAAACCTCATTTGGAAAAAATGTGTCATGGTGTCAATAAAATGCTAGACGAGGGAAACATCTGAGCATTTCCTCTATTTCCAGAGCAGTTTCTTTGACAAAGAACACAGCTGGCTGAAGAAATAGGGGACACTAGCAGGACTGAAAGAATACAATATCCTGTGCACCGGACATGGACCATTTATATACCTAAATGAATGCCTCTGCTTATGCGTGTATTGAATACAACCCACTTTGCCactttgctgtgctgtgctgagaagaatatatatttgtatcatatTGCTCAAAGCAAGCATGATCAGTGGGGAGGCCTGTTGATCACGGCATAGTAGTAGAGTGACTGTGATGGAGTATAGAACTAATACATAGGGACACAGAAGTGCTGGAAATACTCTTAACATCATGCAATACGTTTAAGTTAAAGCTAGAAAACCAAATCCTGTTCTGCCTTGTGATCAAAACACAAGGGGACAATGCTGgggtgaggggtgggggggatctCAGCCAGACTGCCAAATATCTGGTTTGGTAGGATAGATTGTTGGAATGTAACGAGGGAGCGTTGCACCAAAAATAGTTGAACATGGTTGTGGTGCACCGTGAGTTCACCATGCCCTGCTTCACACTCTGTGACTGTTATGAGCGATTTCACATCTTCTGTGCTACAATCATTTTGATTCCAAATAAgttaaattcagttttattctGACCGGAGACTATATTTATAAaggagttttaaaaatacatgtcttTTACTAAATTACTTGGGAATTGAAACTTGATGACCTCCAGCTATTGAATGTGGAAAACTACTATTCTGTATTATGCAATAAAGTCCAGAAAGTAGGCTAAATGctgtaatatattaaatgtgaCAACAAGGAgcgatttgttttttttttaagaagcatGATTCATCTCAGATATGTATCTGCAAAACTGTTGCATTCTGAATAAGTACAACCACATAGATGCTAATCagtcatgtttaatattttagaaGCTATACAGtgtaacatgtattttgtgataCGTGAACTGTAGATATTTCACTCATGCTAATGTGATGTGGAAATTTGCtgtgaacagtttttttttttttattattgccat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010517 True 1954 mRNA 0.42 2 33601543 33608079

Neighbor

gene id symbol gene type direction distance location
AMCG00010519 NA coding upstream 18104 33538850 ~ 33583439 (+)
AMCG00010511 NA coding upstream 491833 33105932 ~ 33109710 (+)
AMCG00010510 NA coding upstream 498176 33101960 ~ 33103367 (+)
AMCG00010512 NA coding upstream 509601 33077831 ~ 33091942 (+)
AMCG00010513 ap3s1 coding upstream 543742 33040995 ~ 33057801 (+)
AMCG00010518 NA coding downstream 8943 33617022 ~ 33638956 (+)
AMCG00010520 hsd17b4 coding downstream 51738 33659817 ~ 33670180 (+)
AMCG00010524 NA coding downstream 342883 33950962 ~ 33954615 (+)
AMCG00010523 NA coding downstream 367123 33975202 ~ 33999854 (+)
AMCG00010526 snx2 coding downstream 431700 34039779 ~ 34057802 (+)
G81279 NA non-coding upstream 285974 33310852 ~ 33315569 (+)
G81226 NA non-coding upstream 573583 33026897 ~ 33027960 (+)
G81215 NA non-coding upstream 633036 32968261 ~ 32968507 (+)
G81149 NA non-coding upstream 926889 32576649 ~ 32674654 (+)
G81115 NA non-coding upstream 1133280 32467842 ~ 32468263 (+)
G81372 NA non-coding downstream 424625 34032704 ~ 34035798 (+)
G81383 NA non-coding downstream 494759 34102838 ~ 34104640 (+)
G81407 NA non-coding downstream 587988 34196067 ~ 34196426 (+)
G81474 NA non-coding downstream 1071897 34679976 ~ 34680716 (+)
G81479 aldh7a1,LOC102786701 non-coding downstream 1076210 34684289 ~ 34685762 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 1071277 32474033 ~ 32530266 (+)
AMCG00010467 NA other upstream 2783940 30766337 ~ 30817603 (+)
AMCG00010431 NA other upstream 4098020 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 5336100 28242989 ~ 28265443 (+)
G80326 NA other upstream 5694714 27906497 ~ 27906829 (+)
AMCG00010529 NA other downstream 295736 33903815 ~ 33938237 (+)
G81496 NA other downstream 1093359 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 1148440 34756519 ~ 34845876 (+)
G81576 NA other downstream 1404236 35012315 ~ 35012693 (+)
AMCG00010562 NA other downstream 1862256 35470335 ~ 35477590 (+)

Expression


Co-expression Network