AMCG00010545 (megf10)


Basic Information

Item Value
gene id AMCG00010545
gene name megf10
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 34756519 ~ 34845876 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010545
atgctTCTTGTTGCAGGTTTAACACCTGAAAAGATGGTCCCTTTTATACACCATCGTGGGTCGCTCTTAATTGCATTAACATGCTACTTAATGGAGGCAACATCATCACTGAACCTTGAAGATCCAAATGTTTGCAGCCACTGGGAAAGCTATTCTATTATTGTTCAAGAGTCCTACGCACACCCCTTTGATCAGATATACTATACGAGCTGCACGGACATCCTTAACTGGTTCAAATGTACAAGACACAGGGTAAGCTACAGGACGGCCTACAGACGAGGGGAAAAGACAATGTACCGACGGAAATCACAGTGCTGTGCTGGTTTCTATGAAAGCAGAGAGATGTGCATCCCTCACTGTACTGATAAATGTGTCCATGGCCGTTGTATTGCTCCCAACACCTGTCAGTGTGAGCCCGGCTGGGGTGGACCCAACTGCTCCAGTGCATGTGATAGTGACCACTGGGGCCCTCACTGCAGTAACCGCTGCCAATGCAAGAACAGGGCCTTGTGTAACCCCATCACCGGCGCGTGTATCTGCACTCCTGGATTCAGAGGCTGGCGATGCGAAGAGTTCTGTGAAGCTGGGACGTATGGGAACGGATGCCAGCAGAAATGCCAGTGCCAAAATGGAGCTGCTTGTGACTATATAACTGGAGAATGCAAATGTTCTCCAGGCTACACGGGAGCTTTCTGTGAGGACCTGTGTCCTCCTGGGAAACATGGCCAGCAGTGTGAAGAGAGATGCCCCTGTCAGAACGGAGGCGTGTGCCACCATGTCACCGGAGAGTGTGCATGTCCAGCAGGCTGGATGGGCACAGTGTGTGGCCAGCCCTGTCCAGAAGGGAGGTTTGGGAGGAACTGTTCTCAGGAGTGCCAGTGTCACAATGGAGGAACGTGTGTCTCATCTTCGGGTCACTGTCACTGCAGCCCTGGATACACCGGGGAGAGGTGCCAAGACGAATGCCCAGTTGGGACATTTGGCGTGAACTGTGCCCAGACGTGCcgctgtgtgaatggagcaaaATGCTACCACATCAgcggggcctgtctgtgtgagCCGGGCTACACCGGAGAACACTGTGAGATCCGATTGTGTCCGGAAGGTGTGTACGGCATCAAGTGTGACAAGAAGTGCCCGTGTCacacccacaacacacacagCTGTCATCCCATGTCTGGCGAGTGTTCCTGCAAGCCTGGTTGGTCGGGGCTCTACTGCAATGAGACATGTGCTCCTGGATTTTATGGGGAATCCTGTCAACAAATCTGCAAGTGCCAGAACGGTGCTGACTGCCACAGTGTGACCGGCCAGTGCATTTGCGCCCCGGGATTTAAGGGCCGAGACTGCTCCACGCCCTGTCCTGAAGGAACTCACGGGGCCAACTGCTCGTCCACGTGTAACTGTAAGAACGGAGCCACGTGCTCTCCAGTGGACGGCTCGTGCTCTTGTAAAGCAGGTTGGCATGGTGTTGACTGCTCTATAAATTGCCCCAGTGGCACCTGGGGTCTGGGCTGCAATGTCACCTGTATGTGTGCTAACGGGGGGGCCTGCAACGCTCTCAATGGCATGTGTACCTGTTCCCCGGGCTGGAGAGGGCAGAAATGTGAATTGCAGTGCCAGGATGGGACCTATGGCATGGACTGCACTGAGCGCTGTGACTGTAGCCACGCGGATGGCTGTCACTCGGCCACAGGTTACTGCCGCTGCCTGGCAGGCTGGACTGGAATCcactgtgacagtgtgtgtgccGAGGGTCGCTGGGGTCCGAACTGCTCGCTCTCCTGCACCTGTAAGAACGGGGCGTCCTGCTCCCCCGACGAGGGCACCTGCGAGTGCGCCCCGGGATTCAGAGGGACCACCTGCCAGAGGATTTGTTCCCCTGGTTACTTTGGCCATCGCTGCAGCCAGGCGTGCCCACAGTGCGTGCACAGCAATGGGCCGTGCCACCACATGACAGGGCAGTGTGACTGCTTGCCAGGGTTCAAGGGAGCCCTCTGCAATGAAGTTTGCCCCAGTGGCCGGTTTGGAAAGAACTGTGCCGGTGTTTGTACCTGCACCAACAATGGGACCTGCAACCCTATCGATGGCTCATGTCAGTGTTACCCAGGGTGGATTGGCAGTGACTGCTCTCAGCCCTGTCCACCTGGGCAATGGGGACCCAACTGTATTCACACCTGCAACTGCCACAACGGTGCTTTCTGCAGCGCGTACGACGGAGAGTGCAAGTGTACTCCTGGCTGGACGGGCCTGTACTGCACACAGCGCTGCCCACTGGGTTACTATGGGAAGGACTGTTCGCTGACATGTCAGTGCCAAAACGGCGCAGACTGCGACCACATATCAGGACAGTGCACCTGCCGCACAGGGTTCATGGGCAAGCATTGCGAGCAAAAGTGTCCTCCAGGCACCTATGGCTATGGTTGCAGGCAGGTGTGTGACTGTCTGAACAACTCCACCTGCGACCACATCACAGGAACCTGCTATTGTAGCCCGGGCTGGAAGGGAGCAAGATGTGACCAAGCTGGCATGATCATCTTGGGCGATCTGAACAGCCTGAGCCACACCAGCACCGTGGTCCCGGCCGAATCCTACCAGATAGGGGCCATCGCCGGCATCATCGTGCTGGTCCTCAttgtcctcttcctcctggCCCTCTTCATCATCTACAGGAAGAAGCAGAAGGGCAAGGAGACCCCCATGCCTGCTGTCACGTACACACCAGCAATGAGGGCCATGAACATGGACTACACCATCACAGAGACCCTTCCGCAGACCAACAGTGGCCATCCCAACAGCAACTACTTCTCCAACCCCAGTTACCACACCCTGACCCAGTGCTCCAGTCCGCCACATGTCAACAACATGGAGAGAGTGCCGCATGGGAAGGCAAGTCGATTAACACTGCTGTTGAATGGCATCTACGCGCAACCGAAAAACAACCAGCTCTTTGTAAATCTGAAGAACGGGGATCCCAGGAAGAGACCCCCAATGATGGACTACACTGGAACCCTACCGGCTGACTGGAAACAAGGAGGCTGCTTTAATGAGCTCGATCTTGTGAAGGGGTCGGCCTATCACTCCAGCTCCTGCTCGCTGAACAGCACAGAGAATCCCTATGCCACCATAAAGGACCCTCCCTTGCTGATGCCAAAGAACACAGAGTGCGGCTATGTGGAGATGAAGTCTCCAGCCCGCAGGGACTCCCCTTACGCAGAGATCGCCAACTCCGCCCCCACCAACAAGAACGTCTACGAAGTTGAACCGACCGTTAGTGTAGTCCATGGGCCTGGCAACAGTACCAGTGGGCCTTTTGGCCAAGACCCATATGACCTTCCAAAGAACAGCCACATTCCTTGTCACTACGATCTGCTGCCTGCCCGGGACagtcccccctccccacacaagGAGCTCAGCAGTGAATGATGCTAGCGGGGGCCGCACTCTCAGACCGCTGTAGGAGCACAGAGACCCACCGTTCTGCCTGGCAAGGAAGCCCTGAGACACGCCCGATGTCCTGCATTGCTGCCTGCTCACCGGCAGCATCTCTCTTCTATAGGGTTTCaccattttgattattattattattattgctattgttattattttaattttgtaatctTGCTTTTCTGAGAAGAACTCTGCAATAGTTTCCGTATCCATTACACAAGTCACAGGGACTCCACACCTCGGGGATCTTAGTTTTAACTCCATTCTCCTTCTGTTCTTTCAtgaattataaaaaagaaatgaataatagCAATCAACAGAGTAACGTGTAAGATATGGAGGAAGATGGTGATAAttctgttttttggggggttaacattcaatagcttccttgtACATCCTGTTTTAGATGCTGCAGATGTTGTTGTACCTTGAAGTCATTCCACTCCTTAATAAAACATATCAGTCAACTGTTtctatagaaaacaaatgtaaaacagaattgaatttatttttgtaacgaTGAACATATACAAGGTTGTTAGCAAATAGGCTATGATAGACTGTACAAGGTTGATTGCCAGTAGAGAGGCCTTGGTTTTATTAATCTAAGGGTGGATATACTAGTACTGTAATACagggtttttatttgtattttgttttatattactgCCACTTtttggtgtttgtgttgtttactGCTTAAATCAAtggtttcttcttcttcacactGTCAAGTAATAATAGTGAGTCCAAAGGAATAGGTGGCCTTCTGAGGCCAGCTAGTACTTTCTATCCTACCAATAGATCTCATGCAATATTGCTAATATCACCATGTTTTAGTAGTAGGCATCCTGCTAGCAGGATTAAAGGGCTTCCGGCAGTACACAGACTGTATTCCCTGGCATTAGGAGGAATCTCTTTTATGAATTCCAGTGTAGATAAATTATGCTTAAGCTGGTCTTTTGCATTGCAATgagcaaca
>TU101677
ACATATATATatatatatatatatatatatatatatatatatatatatatataaaagtatattcaCACTGATAGTCTTTTCTGTAACCTCACTTTGAAAACTATATAtgctttttattagtttttgtaAGCTTTGCTCAATGTGGCATTTTCATTTAGTTCTTATATGTTGGCAGCCGCTCGTCTTAAACTATTCTGAGCCAGACTTGAATCATttgttgtataataaaaaatgtatatagctGTAAATCACTTTACAACTTTTTAAGAAGTGATAATTGGTGACAATTGTAAACTGTACATAAACCCCTCTTTCCtttttgtatattaatacaattgtgcAGATGGTGTGGATTTAAGACTTCCACTGCACTGTACAGACTGCCTAGCTCTGTCAGCATATGTTAATTTTTGCTCTGATAATGGTGAAAAGGCTCCTTCAGATCCAGtcaccattttaaataatttaatttcgaAAGGTATATTTTGTTACTTCTTTTGTGGTAATGGAGAATTGAGTATTAATatgaacaattattttgttcattcttTCAGTCAGaatgtttgtttaaacaaacaagactCAATTTTgcgagctgtttttttttttaatgtgattattaACCCTTTGTCATTCACTGCAATTGTAAAACCAGAgttgataatgtatttttgataaAATGTTCTTGGAAAAATGCATTGTGTTCTGCTTGGGTGTGTAGTTAGAAATTAATAGCTAAAATCCTTGAAATGTAGAAGAGAAATGTATCGCCCCTTTTTAGAAAGACATTTGACTGCTTTGAAGTTTACATCAGTTGGACAGTGTATATAGACATGCAAAATTGCAGCTTTGTTTTCCCTGgttcttttttcttcaaaaagCTAAAAACTGAGATTGCACTTAATTCATGGTTATTTCccaaagattaaataaaaacaatgttttccctTGTACTACCACTTTTACACATggaattactttttaattattttttttctgtagcttATGTGCAAATGCTTTccaataaaagaacaaa

Function

symbol description
megf10 Acts upstream of or within myofibril assembly. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Used to study myopathy. Human ortholog(s) of this gene implicated in early-onset myopathy-areflexia-respiratory distress-dysphagia syndrome. Orthologous to human MEGF10 (multiple EGF like domains 10).

NR:

description
PREDICTED: multiple epidermal growth factor-like domains protein 10 isoform X1

GO: NA

KEGG:

id description
K24068 MEGF10_11; multiple epidermal growth factor-like domains protein 10/11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010545 True 4435 mRNA 0.52 23 34798087 34844851
TU101677 False 1036 lncRNA 0.29 2 34756519 34845876

Neighbor

gene id symbol gene type direction distance location
AMCG00010540 NA coding upstream 34843 34708360 ~ 34721676 (+)
AMCG00010539 NA coding upstream 61838 34688748 ~ 34694681 (+)
AMCG00010537 NA coding upstream 83418 34659357 ~ 34673101 (+)
AMCG00010534 NA coding upstream 504461 34242779 ~ 34252058 (+)
AMCG00010533 csnk1g2,LOC101079856,LOC104942790 coding upstream 527853 34220816 ~ 34228666 (+)
AMCG00010546 prrc1,LOC107572184 coding downstream 2032 34847908 ~ 34857521 (+)
AMCG00010547 NA coding downstream 57627 34903503 ~ 34904362 (+)
AMCG00010550 NA coding downstream 84671 34930547 ~ 34931155 (+)
AMCG00010548 NA coding downstream 116472 34962348 ~ 35003888 (+)
AMCG00010553 NA coding downstream 254239 35100115 ~ 35107055 (+)
G81489 NA non-coding upstream 60215 34694859 ~ 34696304 (+)
G81479 aldh7a1,LOC102786701 non-coding upstream 70757 34684289 ~ 34685762 (+)
G81474 NA non-coding upstream 75803 34679976 ~ 34680716 (+)
G81407 NA non-coding upstream 560093 34196067 ~ 34196426 (+)
G81383 NA non-coding upstream 651879 34102838 ~ 34104640 (+)
G81575 NA non-coding downstream 162696 35008572 ~ 35012190 (+)
G81577 fbn2 non-coding downstream 167079 35012955 ~ 35013654 (+)
G81580 NA non-coding downstream 170199 35016075 ~ 35016334 (+)
G81581 LOC108412713 non-coding downstream 171033 35016909 ~ 35017132 (+)
G81582 NA non-coding downstream 193381 35039257 ~ 35039467 (+)
G81496 NA other upstream 49125 34701438 ~ 34707394 (+)
AMCG00010529 NA other upstream 818282 33903815 ~ 33938237 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 2226253 32474033 ~ 32530266 (+)
AMCG00010467 NA other upstream 3938916 30766337 ~ 30817603 (+)
AMCG00010431 NA other upstream 5252996 29494563 ~ 29503523 (+)
G81576 NA other downstream 166439 35012315 ~ 35012693 (+)
AMCG00010562 NA other downstream 624459 35470335 ~ 35477590 (+)
AMCG00010563 cdc42se2 other downstream 634924 35480800 ~ 35526224 (+)
AMCG00010578 NA other downstream 1231237 36077113 ~ 36079892 (+)
AMCG00010585 NA other downstream 1245663 36091539 ~ 36094497 (+)

Expression


Co-expression Network