Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010546 |
| gene name | prrc1,LOC107572184 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 34847908 ~ 34857521 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| prrc1 | Enables protein kinase A regulatory subunit binding activity. Acts upstream of or within activation of protein kinase A activity; epithelial structure maintenance; and somite specification. Located in Golgi apparatus. Is expressed in several structures, including axis; early embryonic cell; gonad; paraxial mesoderm; and tail bud. Orthologous to human PRRC1 (proline rich coiled-coil 1). |
| description |
|---|
| PREDICTED: protein PRRC1 |
| id | name | namespace |
|---|---|---|
| GO:0034199 | activation of protein kinase A activity | biological_process |
| GO:0001757 | somite specification | biological_process |
| GO:0010669 | epithelial structure maintenance | biological_process |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0034237 | protein kinase A regulatory subunit binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010546 | True | 1329 | mRNA | 0.57 | 8 | 34847908 | 34857521 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010544 | NA | coding | upstream | 63245 | 34769669 ~ 34784663 (+) |
| AMCG00010540 | NA | coding | upstream | 126232 | 34708360 ~ 34721676 (+) |
| AMCG00010539 | NA | coding | upstream | 153227 | 34688748 ~ 34694681 (+) |
| AMCG00010537 | NA | coding | upstream | 174807 | 34659357 ~ 34673101 (+) |
| AMCG00010534 | NA | coding | upstream | 595850 | 34242779 ~ 34252058 (+) |
| AMCG00010547 | NA | coding | downstream | 45982 | 34903503 ~ 34904362 (+) |
| AMCG00010550 | NA | coding | downstream | 73026 | 34930547 ~ 34931155 (+) |
| AMCG00010548 | NA | coding | downstream | 104827 | 34962348 ~ 35003888 (+) |
| AMCG00010553 | NA | coding | downstream | 242594 | 35100115 ~ 35107055 (+) |
| AMCG00010552 | NA | coding | downstream | 264093 | 35121614 ~ 35139130 (+) |
| G81489 | NA | non-coding | upstream | 151604 | 34694859 ~ 34696304 (+) |
| G81479 | aldh7a1,LOC102786701 | non-coding | upstream | 162146 | 34684289 ~ 34685762 (+) |
| G81474 | NA | non-coding | upstream | 167192 | 34679976 ~ 34680716 (+) |
| G81407 | NA | non-coding | upstream | 651482 | 34196067 ~ 34196426 (+) |
| G81383 | NA | non-coding | upstream | 743268 | 34102838 ~ 34104640 (+) |
| G81575 | NA | non-coding | downstream | 151051 | 35008572 ~ 35012190 (+) |
| G81577 | fbn2 | non-coding | downstream | 155434 | 35012955 ~ 35013654 (+) |
| G81580 | NA | non-coding | downstream | 158554 | 35016075 ~ 35016334 (+) |
| G81581 | LOC108412713 | non-coding | downstream | 159388 | 35016909 ~ 35017132 (+) |
| G81582 | NA | non-coding | downstream | 181736 | 35039257 ~ 35039467 (+) |
| AMCG00010545 | megf10 | other | upstream | 2032 | 34756519 ~ 34845876 (+) |
| G81496 | NA | other | upstream | 140514 | 34701438 ~ 34707394 (+) |
| AMCG00010529 | NA | other | upstream | 909671 | 33903815 ~ 33938237 (+) |
| AMCG00010497 | dcp2,LOC107568646,LOC104944318 | other | upstream | 2317642 | 32474033 ~ 32530266 (+) |
| AMCG00010467 | NA | other | upstream | 4030305 | 30766337 ~ 30817603 (+) |
| G81576 | NA | other | downstream | 154794 | 35012315 ~ 35012693 (+) |
| AMCG00010562 | NA | other | downstream | 612814 | 35470335 ~ 35477590 (+) |
| AMCG00010563 | cdc42se2 | other | downstream | 623279 | 35480800 ~ 35526224 (+) |
| AMCG00010578 | NA | other | downstream | 1219592 | 36077113 ~ 36079892 (+) |
| AMCG00010585 | NA | other | downstream | 1234018 | 36091539 ~ 36094497 (+) |
