AMCG00010552


Basic Information

Item Value
gene id AMCG00010552
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35121614 ~ 35139130 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010552
CCCACTGCCTGGCATGTAGTGCAACACACTGGTCACATGACACGCACTTGGCTCTGCTGCAGCAGATACAGACTTTTCGTTTTGTGCGCGGTTGGTGTAGCAGGAGTGTAATAACAGCAGAGTCTggtgaaaatgttattattgtgcTGACGGATATTTCCAGTCGtgctgttcttgttgttttcctactgggcagcagcagcaatgcTCCTAGCATGGGCGATAGCGTTGCTAGCTGGCTTATGCGCCTTGCATATCCTGCAGAAACACAACTTCCCATACTTTTGGAaggactttttttatttaaccaagGTGATCAGGTACGGGATCAAGATCGAGATGTACAAGATGACTTCTCGAGTGGTCACGGTGCTGGACAGGTTTGTGCAGCAGGCGGAGAGACTGCCCGACAAGCCGTTTGTCGTCTTCGAGGGAAGTGTCCACACGTACCGAGACGTGGATAGAAGGAGTAACAAAGTGGCGCAGGTTTTCAGGACGCACGGAGCCGTGCAGAGAGGCGACATTGTGGCCCTTTTAATGAGCAACGAGCCCGACTTCATCTGCACCTGGTTCGGGCTCTGCAAGCTGGGATGCGCGGTGGCGTTTCTCAACACCAACATCAAAGCCAGGTCTCTGCTGCACTGTTTCAGCAGCTGCGGGGCCAAAATGCTCATTATCGGCGCAGACTTGATAGACACACTTGAGGATGTCCTGCCCAGTCTGCAGAAGGACAACATCAGTGTGTGGGTGATGGCCAGGCAGGCCACTAAACCTGGCACATGTACTTTGCTGGACAAACTGGACCAGGCCTCTGAAGAACCGGTACCAGCGTGTCTGCGTGCTGTGTCTTCTGTGAAGGCCCCcacattgtatatttttacttCAGGAACCACAGGACTCCCCAAGGCAGCTGTTATTACCCAACTTCAGACACTCAAGGCAGCTGCAGGGTTTTGGGCCTATGGAGCTACTTATGATGACATTGTGTACATCCCCCTTCCCCTGTATCACAGTGCGGCCTCTCTCATTGGAATCGGTGGAACCATCGAATTAGgTGCTACTTGCATCTTGAAGAAGAAATTCTCAGCGACGCAGTTCTGGAGTGACTGTAAAAAGTACAACATAACCGTGTTCCAGTACATCGGAGAGCTCTGTCGCTACCTCTGCAATCAGCCCAGAAAAGAAGGTGAAAAAGACCACAAGGTTCACATGGCGGTGGGGAACGGCATGCGTCAGGACATTTGGAAAGAGTTCCTCGATCgctttgggaacattaaaatgTGTGAGCTCTATGGGTCCACAGAAGGGAATGTTTGCTTCATGAACCACACTGGGCAAATAGGAGCCGTCGGTCGTTCCAATTTCTTCTACAAGttattttttaagtacCAAATGGTGAAATATGATCTGGAGAAGGACGAACCTGTGCGAAACAAACAAGGCTTTTGTGAGCTGGTGCAGAAAGGTGAGACGGGACTGATGTTATCGCAGGTAAATTCGAAGAACCCGTTTTTTGGCTACGCCGGAAGCAAAATGCTCACGGAGAAGAAACTGCTACGGGACGTCTTCAGGAAAGGAGATGCCTATTTTAACACTGGGGATTTAATGTGTGAAGACCATGACAACTTTGTTCATTTCAAGGACAGAATTGGAGATACGTTCAGGTGGAAAGGGgaaaatgttgccacaacggAGGTAACTGACATGATTGGACTGATGGACTTTTTGCAAGAGGCAAATGTATATGGGGTTGAAGTTCCAGGCATGGCAGCAGTTATTCTCAAACCTGGCTGTGAATTCGATGGGAAGAAGCTGTATGAGCACGTAGCCGAACACCTGCCGAGCTACGCACAGCCACGGTTCATTAGAATTCAGGAATCAATGGACATGACTGGAACCTACAAGCAGCAAAAGTTTCGATTAGTGCGAGATGGATTCAACCCTTCACATGTGACAGACCCCTTGTATTTCTTAGATTATTCAGAGAAATGTTACATCCCTCTAACGAAGGCCATCTATGAAGACATTGTCTCTGGGCAACAGAAGCTGTAGCAGTCTGTGTTTTCAGGCTCCTAATTATTGTTCTACTGGCACAACAGTGTAGGAATGGCAATTTAATGCACTATGTAATGTTATACCTGGTGGGCAAAGCAAAGTGCTCCCGGTcaaataatcattaaataattgatgATTTCCTTAGTTGTGAGCAATTTACAGAGACAGTGCAGGTTAATAATACATAACTTTGACATAGTAAAGGTCATGCTAACATCGGTGATCTTAAGATGGCAAAACAATGGAGGAGTTTACATTTCCACTTGCAGTTTCAGCTAGAGACTAGATAGGTTGAGCAATTctgatcatatttttaaatttaagttaTTAGATTAATCTTGGTATTGGTTTTCAGAAATTCCAGATTCAGTCCCCAGTACAGTATAAACCCAGAACATTTCAAGCAAGTAATGAAACCTAAACAGAAAAGCGCCCTCAGTTACTAACTACTTCATCATTCAGTTCTGAACTAAGttaattgttgtttaatttagaCCAATCAGACATTAAAAAGAGCTCAGTAGAGTTCCATTAAAGATTGccaaaatgtgtaatttcagGTAAAAGTTGTAGTGTAtaggtttcatttaattacatttgaaattgaacacagctcaaaatgtcatattatgattacatttttaattttgggaaGGCTCTGTGATGTAATCGCATCTATTACCCTGTActattgtttttacacaaaaatgattgtgttttttcccttactacaaaataaaaaaaatgaataaataagcaaaccaacaaataaataactataataatgaCTATAATCATACAATTTTAACCTTCATAGTTATTGACAATGGATCTTACCTGGAAAGCTAAGCAGTGGGTCTGCTACATatgttgaatatttaaaaagtatcaaTGCTGCTCCTAAATCTTTTTGCATTGCAGATTTTTATGaatttttaaagtattacaaagTGTACAAAATTGTTAAGCTGATTTTTACACCTCATGCTCTGTGTTTTAGCTAAACTGTGCATCTCCAGCTGAGGGAGTACAATCATGTGTTTCCTTGAGGTTTTCACATGGCAGAACATTGTTACTGTTAACAATTACGGGTAATGGACtaaaagttacaaaataaatgtagttgtATTCTGACTAAAGCTGGTTTTCAAGTTAAATATTTCTGGAGTATctgtaaaaagtattttaaggTTTCCTAATATGATCACTACACAAggttaataaaaatattcttaattacatcca

Function

GO: NA

KEGG:

id description
K08749 SLC27A6, FATP6; solute carrier family 27 (fatty acid transporter), member 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010552 True 3300 mRNA 0.42 10 35121614 35139130

Neighbor

gene id symbol gene type direction distance location
AMCG00010553 NA coding upstream 14559 35100115 ~ 35107055 (+)
AMCG00010548 NA coding upstream 117726 34962348 ~ 35003888 (+)
AMCG00010550 NA coding upstream 190459 34930547 ~ 34931155 (+)
AMCG00010547 NA coding upstream 217252 34903503 ~ 34904362 (+)
AMCG00010546 prrc1,LOC107572184 coding upstream 264093 34847908 ~ 34857521 (+)
AMCG00010551 isoc1 coding downstream 3436 35142566 ~ 35149632 (+)
AMCG00010557 NA coding downstream 43801 35182931 ~ 35183883 (+)
AMCG00010555 NA coding downstream 50253 35189383 ~ 35193509 (+)
AMCG00010556 adamts19 coding downstream 77088 35216218 ~ 35250157 (+)
AMCG00010559 NA coding downstream 111706 35250836 ~ 35257291 (+)
G81586 NA non-coding upstream 19030 35102352 ~ 35102584 (+)
G81583 NA non-coding upstream 71002 35050405 ~ 35050612 (+)
G81582 NA non-coding upstream 82147 35039257 ~ 35039467 (+)
G81581 LOC108412713 non-coding upstream 104482 35016909 ~ 35017132 (+)
G81580 NA non-coding upstream 105280 35016075 ~ 35016334 (+)
G81675 NA non-coding downstream 523033 35662163 ~ 35666680 (+)
G81707 NA non-coding downstream 563559 35702689 ~ 35704527 (+)
G81710 NA non-coding downstream 568387 35707517 ~ 35713953 (+)
G81812 NA non-coding downstream 1005708 36144838 ~ 36145081 (+)
G81814 NA non-coding downstream 1008413 36147543 ~ 36148008 (+)
G81576 NA other upstream 108921 35012315 ~ 35012693 (+)
AMCG00010545 megf10 other upstream 275738 34756519 ~ 34845876 (+)
G81496 NA other upstream 414220 34701438 ~ 34707394 (+)
AMCG00010529 NA other upstream 1183377 33903815 ~ 33938237 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 2591348 32474033 ~ 32530266 (+)
AMCG00010562 NA other downstream 331205 35470335 ~ 35477590 (+)
AMCG00010563 cdc42se2 other downstream 341670 35480800 ~ 35526224 (+)
AMCG00010578 NA other downstream 937983 36077113 ~ 36079892 (+)
AMCG00010585 NA other downstream 952409 36091539 ~ 36094497 (+)
G81971 NA other downstream 2091298 37230428 ~ 37251169 (+)

Expression


Co-expression Network